RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 INO80BQ9C086 356 aaPredicted RBP25.28■■□□□ 1.64
HMG20B-214ENST00000493191 NRDE2Q9H7Z3 1164 aa25.28■■□□□ 1.64
HMG20B-214ENST00000493191 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
HMG20B-214ENST00000493191 FAM105AQ9NUU6 356 aa25.28■■□□□ 1.64
HMG20B-214ENST00000493191 DDX25Q9UHL0 483 aaKnown RBP25.28■■□□□ 1.64
HMG20B-214ENST00000493191 USP34Q70CQ2 3546 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 EML1O00423 815 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 PSMC5P62195 406 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 STK3Q13188 491 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 NONOQ15233 471 aaKnown RBP eCLIP25.27■■□□□ 1.64
HMG20B-214ENST00000493191 INF2Q27J81 1249 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 NOMO2Q5JPE7 1267 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 GLB1LQ6UWU2 654 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 DDX53Q86TM3 631 aaKnown RBP25.27■■□□□ 1.64
HMG20B-214ENST00000493191 IGSF21Q96ID5 467 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 GBP3Q9H0R5 595 aa25.27■■□□□ 1.64
HMG20B-214ENST00000493191 SLC37A4O43826 429 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 OFD1O75665 1012 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 GALTP07902 379 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 SKIP12755 728 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 RNASELQ05823 741 aaKnown RBP25.26■■□□□ 1.63
HMG20B-214ENST00000493191 MOXD1Q6UVY6 613 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 DAGLBQ8NCG7 672 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 BCL7CQ8WUZ0 217 aaPredicted RBP25.26■■□□□ 1.63
HMG20B-214ENST00000493191 RIPOR3Q96MK2 946 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 CYP46A1Q9Y6A2 500 aa25.26■■□□□ 1.63
HMG20B-214ENST00000493191 CTSAP10619 480 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 EPCAMP16422 314 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 MTHFRP42898 656 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 NPEPPSP55786 919 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 LETM2Q2VYF4 491 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 ZNF274Q96GC6 653 aaPredicted RBP25.25■■□□□ 1.63
HMG20B-214ENST00000493191 SLKQ9H2G2 1235 aaPredicted RBP25.25■■□□□ 1.63
HMG20B-214ENST00000493191 IFT122Q9HBG6 1241 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 CYP26B1Q9NR63 512 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 FAM86C1Q9NVL1 165 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 DNAJB4Q9UDY4 337 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 KCNJ14Q9UNX9 436 aa25.25■■□□□ 1.63
HMG20B-214ENST00000493191 ZNF623O75123 536 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 BRD1O95696 1058 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 RAB27AP51159 221 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 POLGP54098 1239 aaPredicted RBP25.24■■□□□ 1.63
HMG20B-214ENST00000493191 MTMR3Q13615 1198 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 GALNT17Q6IS24 598 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 ZNF579Q8NAF0 562 aaKnown RBP25.24■■□□□ 1.63
HMG20B-214ENST00000493191 RSPH1Q8WYR4 309 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 JPH2Q9BR39 696 aaPredicted RBP25.24■■□□□ 1.63
HMG20B-214ENST00000493191 SMOC2Q9H3U7 446 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 SORCS3Q9UPU3 1222 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 PCDHB2Q9Y5E7 798 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 IRAK3Q9Y616 596 aa25.24■■□□□ 1.63
HMG20B-214ENST00000493191 B4GALT3O60512 393 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 QARSP47897 775 aaKnown RBP25.23■■□□□ 1.63
HMG20B-214ENST00000493191 SLC11A1P49279 550 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 GIT2Q14161 759 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 ATAT1Q5SQI0 421 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 KRT25Q7Z3Z0 450 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 ZNF280BQ86YH2 543 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 FEZF2Q8TBJ5 459 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 SLC22A17Q8WUG5 538 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 VN1R3Q9BXE9 311 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 DZANK1Q9NVP4 752 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 VAV3Q9UKW4 847 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 COL4A3BPQ9Y5P4 624 aa25.23■■□□□ 1.63
HMG20B-214ENST00000493191 CARNS1A5YM72 827 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 ASGR2P07307 311 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 PPP2R5CQ13362 524 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 CPLX2Q6PUV4 134 aaKnown RBP25.22■■□□□ 1.63
HMG20B-214ENST00000493191 UBALD2Q8IYN6 164 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 SLC7A3Q8WY07 619 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 TMEM143Q96AN5 459 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 PGBD4Q96DM1 585 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 AGPAT5Q9NUQ2 364 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 WRAP73Q9P2S5 460 aaPredicted RBP25.22■■□□□ 1.63
HMG20B-214ENST00000493191 LIMD1Q9UGP4 676 aa25.22■■□□□ 1.63
HMG20B-214ENST00000493191 DBR1Q9UK59 544 aaKnown RBP25.22■■□□□ 1.63
HMG20B-214ENST00000493191 SRGAP2CP0DJJ0 459 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 KIAA1841Q6NSI8 718 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 TMC5Q6UXY8 1006 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 AGMOQ6ZNB7 445 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 FAM177A1Q8N128 213 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-214ENST00000493191 TDRD5Q8NAT2 981 aaKnown RBP25.21■■□□□ 1.63
HMG20B-214ENST00000493191 PRPF31Q8WWY3 499 aaKnown RBP25.21■■□□□ 1.63
HMG20B-214ENST00000493191 ATOH1Q92858 354 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-214ENST00000493191 CEP170P1Q96L14 293 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 MINDY3Q9H8M7 445 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 KCNMB3Q9NPA1 279 aa25.21■■□□□ 1.63
HMG20B-214ENST00000493191 BMP2KQ9NSY1 1161 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-214ENST00000493191 CCDC194A0A1B0GVG4 234 aa25.2■■□□□ 1.62
HMG20B-214ENST00000493191 SSBP05455 408 aaKnown RBP eCLIP25.2■■□□□ 1.62
HMG20B-214ENST00000493191 P4HBP07237 508 aaKnown RBP25.2■■□□□ 1.62
HMG20B-214ENST00000493191 AFF1P51825 1210 aaKnown RBP25.2■■□□□ 1.62
HMG20B-214ENST00000493191 PTPN14Q15678 1187 aa25.2■■□□□ 1.62
HMG20B-214ENST00000493191 CABP7Q86V35 215 aa25.2■■□□□ 1.62
HMG20B-214ENST00000493191 URGCPQ8TCY9 931 aa25.2■■□□□ 1.62
HMG20B-214ENST00000493191 FAM20AQ96MK3 541 aa25.2■■□□□ 1.62
HMG20B-214ENST00000493191 ZFHX2Q9C0A1 2572 aaPredicted RBP25.2■■□□□ 1.62
HMG20B-214ENST00000493191 H0Y858 1186 aa25.19■■□□□ 1.62
HMG20B-214ENST00000493191 DDHD2O94830 711 aa25.19■■□□□ 1.62
HMG20B-214ENST00000493191 SRGAP1Q7Z6B7 1085 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms