RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 KRT86O43790 486 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 TIMP1P01033 207 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ICAM1P05362 532 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 EN2P19622 333 aaPredicted RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 SREBF1P36956 1147 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ADAM9Q13443 819 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MEA1Q16626 185 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 TXLNBQ8N3L3 684 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 NOA1Q8NC60 698 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 RABGGTAQ92696 567 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 FHOD1Q9Y613 1164 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MYH10P35580 1976 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CYP3A7-CYP3A51PA0A087WV96 503 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 FAM170AA1A519 330 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CTAGE15A4D2H0 777 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 FOSP01100 380 aaPredicted RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 CTAGE8P0CG41 777 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CYP3A7P24462 503 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 NR2F2P24468 414 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 SLC12A3P55017 1021 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 POLR2FP61218 127 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 KCNA1Q09470 495 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CTAGE6Q86UF2 777 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CTAGE4Q8IX94 777 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 FAM126BQ8IXS8 530 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CPXCR1Q8N123 301 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 CEP112Q8N8E3 955 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 PCSK9Q8NBP7 692 aaKnown RBP7.68□□□□□ -1.18
HERC4-211ENST00000492996 CRYGNQ8WXF5 182 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MLXIPQ9HAP2 919 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 MTMR10Q9NXD2 777 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 FLRT1Q9NZU1 646 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 PCDHA11Q9Y5I1 949 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.68□□□□□ -1.18
HERC4-211ENST00000492996 COL1A2P08123 1366 aa7.68□□□□□ -1.18
HERC4-211ENST00000492996 ZNF185O15231 689 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 MYBP10242 640 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 AKR1A1P14550 325 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 CALRP27797 417 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 KCNMA1Q12791 1236 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 KIF5AQ12840 1032 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 BIRC2Q13490 618 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 GIT2Q14161 759 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 ZCWPW2Q504Y3 356 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 COBLL1Q53SF7 1204 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 HYIQ5T013 277 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 TCERG1LQ5VWI1 586 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 CEP120Q8N960 986 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 RAET1EQ8TD07 263 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 PNKPQ96T60 521 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 SENP7Q9BQF6 1050 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 EIF2AK1Q9BQI3 630 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 RUSC1Q9BVN2 902 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 LSM14BQ9BX40 385 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 IFIH1Q9BYX4 1025 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 RC3H2Q9HBD1 1191 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 JADE2Q9NQC1 790 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 HOMER2Q9NSB8 354 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 PLAGL2Q9UPG8 496 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 C19orf67A6NJJ6 358 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 CLIC2O15247 247 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 SASH3O75995 380 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 RPA1P27694 616 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 DNA2P51530 1060 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 KIF11P52732 1056 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 ADAM17P78536 824 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 TAPT1Q6NXT6 567 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 CC2D1AQ6P1N0 951 aaPredicted RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 PSRC1Q6PGN9 363 aaPredicted RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 DLK2Q6UY11 383 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 KSR1Q8IVT5 923 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 NPLOC4Q8TAT6 608 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 ATXN2LQ8WWM7 1075 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 MBOAT7Q96N66 472 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 ARFGAP3Q9NP61 516 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 DONSONQ9NYP3 566 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 STK39Q9UEW8 545 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 PCDHA2Q9Y5H9 948 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 EIF3CLB5ME19 914 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 GCOM1H8Y6P7 765 aaPredicted RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 GCNT3O95395 438 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 POLR2MP0CAP2 368 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 NAP1L1P55209 391 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 GFPT1Q06210 699 aaPredicted RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 ZSCAN26Q16670 478 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 DCAF17Q5H9S7 520 aaPredicted RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 MAEAQ7L5Y9 396 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 PRPF38AQ8NAV1 312 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 DYDC2Q96IM9 177 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 EIF3CQ99613 913 aaKnown RBP7.67□□□□□ -1.18
HERC4-211ENST00000492996 ANKZF1Q9H8Y5 726 aa7.67□□□□□ -1.18
HERC4-211ENST00000492996 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 H0YGN5 161 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CETN3O15182 167 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 TBCAO75347 108 aaKnown RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 ZRANB2O95218 330 aaKnown RBP eCLIP7.66□□□□□ -1.183e-7■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms