RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 POF1BQ8WVV4 589 aa13.13□□□□□ -0.31
MDC1-207ENST00000492462 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
MDC1-207ENST00000492462 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
MDC1-207ENST00000492462 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
MDC1-207ENST00000492462 NOL7Q9UMY1 257 aaKnown RBP13.13□□□□□ -0.31
MDC1-207ENST00000492462 H3BQ06 376 aaPredicted RBP13.12□□□□□ -0.31
MDC1-207ENST00000492462 USO1O60763 962 aaKnown RBP13.12□□□□□ -0.31
MDC1-207ENST00000492462 GLRA2P23416 452 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 HYAL1Q12794 435 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 PTGDRQ13258 359 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 CAPSQ13938 189 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 IL17AQ16552 155 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 AAK1Q2M2I8 961 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 EP400NLQ6ZTU2 488 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 EXOC8Q8IYI6 725 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 POLR3CQ9BUI4 534 aaPredicted RBP13.12□□□□□ -0.31
MDC1-207ENST00000492462 INO80BQ9C086 356 aaPredicted RBP13.12□□□□□ -0.31
MDC1-207ENST00000492462 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 AGPAT5Q9NUQ2 364 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
MDC1-207ENST00000492462 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
MDC1-207ENST00000492462 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 LINC01565O15544 149 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 ASAP2O43150 1006 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 HOXA2O43364 376 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 DGAT1O75907 488 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 FGF18O76093 207 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 EOMESO95936 686 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 LTBRP36941 435 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 PTENP60484 403 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 FOXK2Q01167 660 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 DLX2Q07687 328 aaPredicted RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 NAALADL2Q58DX5 795 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
MDC1-207ENST00000492462 CLDND1Q9NY35 253 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
MDC1-207ENST00000492462 B4GALT3O60512 393 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 TSPAN1O60635 241 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 ZNF623O75123 536 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.31
MDC1-207ENST00000492462 LAG3P18627 525 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 RPA1P27694 616 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 CDC25AP30304 524 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 CCT6AP40227 531 aaKnown RBP13.1□□□□□ -0.31
MDC1-207ENST00000492462 MCM2P49736 904 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
MDC1-207ENST00000492462 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
MDC1-207ENST00000492462 ERVFC1P60507 584 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
MDC1-207ENST00000492462 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
MDC1-207ENST00000492462 CPB2Q96IY4 423 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 LRWD1Q9UFC0 647 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 DBR1Q9UK59 544 aaKnown RBP13.1□□□□□ -0.31
MDC1-207ENST00000492462 SMC3Q9UQE7 1217 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
MDC1-207ENST00000492462 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 NT5C1B-RDH14C9J2C7 533 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 INO80B-WBP1J3KQ70 363 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 B4GALT5O43286 388 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 TBX10O75333 385 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 OFD1O75665 1012 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 IL9P15248 144 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 MXD4Q14582 209 aaPredicted RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 AMHR2Q16671 573 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 PADI6Q6TGC4 694 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 TMEM173Q86WV6 379 aaPredicted RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 ERMNQ8TAM6 284 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms