RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GUCY2CP25092 1073 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 ACTN2P35609 894 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 QARSP47897 775 aaKnown RBP13.51□□□□□ -0.25
HMGN1-220ENST00000492280 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-220ENST00000492280 C1orf220Q5T0J3 134 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 DCAF12L1Q5VU92 463 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 BSNDQ8WZ55 320 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 NENFQ9UMX5 172 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 FERP16591 822 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 FLT3P36888 993 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 HMGCS2P54868 508 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 PHLDB2Q86SQ0 1253 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 VPS36Q86VN1 386 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 ZBED3Q96IU2 234 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-220ENST00000492280 RIT2Q99578 217 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 DPH5Q9H2P9 285 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 CENPHQ9H3R5 247 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 LARSQ9P2J5 1176 aaKnown RBP13.51□□□□□ -0.25
HMGN1-220ENST00000492280 HACL1Q9UJ83 578 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
HMGN1-220ENST00000492280 NFKBIEO00221 500 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 TBC1D12O60347 775 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 ITIH3Q06033 890 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 ARHGEF16Q5VV41 709 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 LRRC31Q6UY01 552 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 LEKR1Q6ZMV7 388 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 GOLGA6L1Q8N7Z2 621 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
HMGN1-220ENST00000492280 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 TRIM51Q9BSJ1 452 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 UBIAD1Q9Y5Z9 338 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 KRIT1O00522 736 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
HMGN1-220ENST00000492280 TTI1O43156 1089 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 FGGP02679 453 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-220ENST00000492280 KRT13P13646 458 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 GMPSP49915 693 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-220ENST00000492280 VAMP7P51809 220 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 STRA6Q9BX79 667 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 GDF3Q9NR23 364 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
HMGN1-220ENST00000492280 WDR81Q562E7 1941 aa13.5□□□□□ -0.25
HMGN1-220ENST00000492280 CEP350Q5VT06 3117 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SART1O43290 800 aaKnown RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SGPL1O95470 568 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ADSSP30520 456 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 BAG6P46379 1132 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ANO5Q75V66 913 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SEL1LQ9UBV2 794 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SYNPO2Q9UMS6 1093 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ADGRA3Q8IWK6 1321 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ZNFX1Q9P2E3 1918 aaKnown RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ZNF233A6NK53 670 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 PLS3P13797 630 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 TRAF1Q13077 416 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 TNIP1Q15025 636 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 SNRNP48Q6IEG0 339 aaKnown RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 STXBP4Q6ZWJ1 553 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 IFT20Q8IY31 132 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 FAM76AQ8TAV0 307 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 CTNNBL1Q8WYA6 563 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-220ENST00000492280 ALG3Q92685 438 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 TMEM117Q9H0C3 514 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 CALCOCO1Q9P1Z2 691 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 RSPH14Q9UHP6 348 aa13.49□□□□□ -0.25
HMGN1-220ENST00000492280 PGRMC1O00264 195 aaKnown RBP13.48□□□□□ -0.25
HMGN1-220ENST00000492280 TRIM66O15016 1216 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 ZNF862O60290 1169 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 ECHS1P30084 290 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms