RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 NT5C1B-RDH14C9J2C7 533 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 PLA2G5P39877 138 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 BCAR1P56945 870 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 TRIM29Q14134 588 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 CTTNQ14247 550 aaKnown RBP20.55■□□□□ 0.88
SMIM4-205ENST00000491607 XKR9Q5GH70 373 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 C4orf19Q8IY42 314 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 SLC39A11Q8N1S5 342 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
SMIM4-205ENST00000491607 TRAIPQ9BWF2 469 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 DHX33Q9H6R0 707 aaKnown RBP20.55■□□□□ 0.88
SMIM4-205ENST00000491607 ZSWIM4Q9H7M6 989 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 IFT122Q9HBG6 1241 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 FAM105AQ9NUU6 356 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 MUTYHQ9UIF7 546 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 INPP5FQ9Y2H2 1132 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 PPME1Q9Y570 386 aa20.55■□□□□ 0.88
SMIM4-205ENST00000491607 JAK2O60674 1132 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
SMIM4-205ENST00000491607 ZC3H11AO75152 810 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMIM4-205ENST00000491607 RAB27AP51159 221 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 SPIRE1Q08AE8 756 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 EMC2Q15006 297 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 CALCRLQ16602 461 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 GLB1LQ6UWU2 654 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 RNF135Q8IUD6 432 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 TPH2Q8IWU9 490 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 TNFRSF25Q93038 417 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 AGPAT5Q9NUQ2 364 aa20.54■□□□□ 0.88
SMIM4-205ENST00000491607 BTBD18B2RXH4 712 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 ZBTB39O15060 712 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 TECP42680 631 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 RNASELQ05823 741 aaKnown RBP20.53■□□□□ 0.88
SMIM4-205ENST00000491607 LAMTOR4Q0VGL1 99 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 SMC1AQ14683 1233 aaKnown RBP20.53■□□□□ 0.88
SMIM4-205ENST00000491607 DIS3L2Q8IYB7 885 aaKnown RBP20.53■□□□□ 0.88
SMIM4-205ENST00000491607 TCP11Q8WWU5 503 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 PCDHA12Q9UN75 941 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 C5orf42Q9H799 3197 aa20.53■□□□□ 0.88
SMIM4-205ENST00000491607 MEIS3P2A8K0S8 358 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 NOMO2Q5JPE7 1267 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 SRGAP1Q7Z6B7 1085 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 RNF149Q8NC42 400 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 RSPH1Q8WYR4 309 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 PGBD4Q96DM1 585 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 RPGRIP1Q96KN7 1286 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 MTRQ99707 1265 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 EIF2AK1Q9BQI3 630 aaKnown RBP20.52■□□□□ 0.88
SMIM4-205ENST00000491607 APOL5Q9BWW9 433 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 GBP3Q9H0R5 595 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 MINDY3Q9H8M7 445 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 PCDHB2Q9Y5E7 798 aa20.52■□□□□ 0.88
SMIM4-205ENST00000491607 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 NEMFO60524 1076 aa20.51■□□□□ 0.87
SMIM4-205ENST00000491607 SLITRK3O94933 977 aa20.51■□□□□ 0.87
SMIM4-205ENST00000491607 BMS1Q14692 1282 aaKnown RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 HERC4Q5GLZ8 1057 aaPredicted RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
SMIM4-205ENST00000491607 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
SMIM4-205ENST00000491607 MRPL43Q8N983 215 aaKnown RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 CCDC43Q96MW1 224 aaKnown RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 PHF7Q9BWX1 381 aaPredicted RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 TTC12Q9H892 705 aaPredicted RBP20.51■□□□□ 0.87
SMIM4-205ENST00000491607 TBC1D13Q9NVG8 400 aa20.51■□□□□ 0.87
SMIM4-205ENST00000491607 C2orf71A6NGG8 1288 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 ASAP2O43150 1006 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 ZNF623O75123 536 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 OFD1O75665 1012 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 TXKP42681 527 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 KCNC3Q14003 757 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 FERMT3Q86UX7 667 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 TMEM173Q86WV6 379 aaPredicted RBP20.5■□□□□ 0.87
SMIM4-205ENST00000491607 TMEM87AQ8NBN3 555 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 URGCPQ8TCY9 931 aa20.5■□□□□ 0.87
SMIM4-205ENST00000491607 ARIH1Q9Y4X5 557 aaPredicted RBP20.5■□□□□ 0.87
SMIM4-205ENST00000491607 LOC730098B7Z3J9 87 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 ERLIN2O94905 339 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 SEC24BO95487 1268 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 CXCL14O95715 111 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 CBX2Q14781 532 aaPredicted RBP20.49■□□□□ 0.87
SMIM4-205ENST00000491607 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 SUSD6Q92537 303 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 CASP10Q92851 521 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 NRDE2Q9H7Z3 1164 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 DNAJB4Q9UDY4 337 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 HCFC2Q9Y5Z7 792 aa20.49■□□□□ 0.87
SMIM4-205ENST00000491607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.48■□□□□ 0.87
SMIM4-205ENST00000491607 CARNS1A5YM72 827 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 WNT7AO00755 349 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 ATP2B1P20020 1258 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 HOXA11P31270 313 aaPredicted RBP20.48■□□□□ 0.87
SMIM4-205ENST00000491607 GUCY1B3Q02153 619 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 MXD4Q14582 209 aaPredicted RBP20.48■□□□□ 0.87
SMIM4-205ENST00000491607 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 AGMOQ6ZNB7 445 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 AUTS2Q8WXX7 1259 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 IGSF21Q96ID5 467 aa20.48■□□□□ 0.87
SMIM4-205ENST00000491607 HSD17B14Q9BPX1 270 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms