RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RPS6KA4O75676 772 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 RAD17O75943 681 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF202O95125 648 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 RAPGEF3O95398 923 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 C4BPAP04003 597 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CAPNS1P04632 268 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CANXP27824 592 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 STAT3P40763 770 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ETV4P43268 484 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 MTHFSP49914 203 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 KRTAP10-2P60368 255 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 LACTBP83111 547 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 DGCR2P98153 550 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ROM1Q03395 351 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 BMS1Q14692 1282 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 NFE2L2Q16236 605 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ARHGAP44Q17R89 818 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 C21orf62-AS1Q17RA5 79 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 LONRF2Q1L5Z9 754 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ALDH1L2Q3SY69 923 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CFAP100Q494V2 611 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 GLIPR1L2Q4G1C9 344 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 HABP4Q5JVS0 413 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF662Q6ZS27 426 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 LARP4Q71RC2 724 aaKnown RBP eCLIP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 BRAPQ7Z569 592 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SMC5Q8IY18 1101 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF808Q8N4W9 903 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC7A14Q8TBB6 771 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 THAP3Q8WTV1 239 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ASB15Q8WXK1 588 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 RPGRQ92834 1020 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 GFM2Q969S9 779 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 C22orf23Q9BZE7 217 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC12A5Q9H2X9 1139 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 NELFAQ9H3P2 528 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ZSWIM4Q9H7M6 989 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SMURF1Q9HCE7 757 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 PARPBPQ9NWS1 579 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SNTG2Q9NY99 539 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 KCNG1Q9UIX4 513 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 DENND2AQ9ULE3 1009 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 DDX19BQ9UMR2 479 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 HDAC5Q9UQL6 1122 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 GIT1Q9Y2X7 761 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 TESMINQ9Y4I5 508 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 PLA2R1Q13018 1463 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 PLB1Q6P1J6 1458 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CCDC141Q6ZP82 1450 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CFAP65Q6ZU64 1925 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 E9PCH4 1651 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CROCC2H7BZ55 1655 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 PIK3C2GO75747 1445 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 DISP3Q9P2K9 1392 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ABCA8O94911 1581 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 MAST1Q9Y2H9 1570 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ASXL1Q8IXJ9 1541 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 DUOX2Q9NRD8 1548 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 FAM135AQ9P2D6 1515 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF608Q9ULD9 1512 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 KIAA1210Q9ULL0 1709 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 UBA6A0AVT1 1052 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PTPDC1A2A3K4 754 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 GOLGA6L22H0YM25 854 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 KIF3BO15066 747 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 RAB11FIP3O75154 756 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PPFIA2O75334 1257 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ADH4P08319 380 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 XRCC6P12956 609 aaKnown RBP eCLIP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 XPAP23025 273 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 AOAHP28039 575 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 TMPOP42166 694 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 TERF1P54274 439 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 NPEPPSP55786 919 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 SESN2P58004 480 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 BPIFB4P59827 614 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PTH1RQ03431 593 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 CALD1Q05682 793 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 FSTL1Q12841 308 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 FOXL1Q12952 345 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 MVPQ14764 893 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 EIF4HQ15056 248 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 TMEM177Q53S58 311 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 TTC38Q5R3I4 469 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PIK3R6Q5UE93 754 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 SLFN12LQ6IEE8 588 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 CNNM4Q6P4Q7 775 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 KLHDC10Q6PID8 442 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ATF7IPQ6VMQ6 1270 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 RNF207Q6ZRF8 634 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 CLEC17AQ6ZS10 378 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 GAREM2Q75VX8 874 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PASD1Q8IV76 773 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 CCDC146Q8IYE0 955 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 AFAP1Q8N556 730 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ANKRD53Q8N9V6 530 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 DNERQ8NFT8 737 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 GCC1Q96CN9 775 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PGBD4Q96DM1 585 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 WWC2-AS2Q96NR7 200 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms