RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 ASAP2O43150 1006 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 EYA4O95677 639 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 COL9A1P20849 921 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
IMP4-216ENST00000490895 PBX3P40426 434 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 TXKP42681 527 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 RAB27AP51159 221 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 GUCY1B3Q02153 619 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 SAFBQ15424 915 aaKnown RBP eCLIP17.12■□□□□ 0.33
IMP4-216ENST00000490895 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 ADHFE1Q8IWW8 467 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
IMP4-216ENST00000490895 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 XPNPEP1Q9NQW7 623 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 ANKEF1Q9NU02 776 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 FAM105AQ9NUU6 356 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 C5orf42Q9H799 3197 aa17.12■□□□□ 0.33
IMP4-216ENST00000490895 PER2O15055 1255 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
IMP4-216ENST00000490895 COASYQ13057 564 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 DUSP6Q16828 381 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 SLC39A11Q8N1S5 342 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 LPPQ93052 612 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
IMP4-216ENST00000490895 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
IMP4-216ENST00000490895 MTRQ99707 1265 aa17.11■□□□□ 0.33
IMP4-216ENST00000490895 FSD2A1L4K1 749 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 MCM7P33993 719 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 BCAR1P56945 870 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 HMGN5P82970 282 aaKnown RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 KRT17Q04695 432 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 FBXO18Q8NFZ0 1043 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 TCF25Q9BQ70 676 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 FOXP1Q9H334 677 aaPredicted RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 C11orf16Q9NQ32 467 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
IMP4-216ENST00000490895 PCDHB2Q9Y5E7 798 aa17.1■□□□□ 0.33
IMP4-216ENST00000490895 POTEMA6NI47 508 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 GPR37L1O60883 481 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 OFD1O75665 1012 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 DGAT1O75907 488 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
IMP4-216ENST00000490895 ATP2B1P20020 1258 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
IMP4-216ENST00000490895 RARRES1P49788 294 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
IMP4-216ENST00000490895 POU5F1BQ06416 359 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 KCNC3Q14003 757 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 NOMO2Q5JPE7 1267 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
IMP4-216ENST00000490895 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
IMP4-216ENST00000490895 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
IMP4-216ENST00000490895 LRFN3Q9BTN0 628 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
IMP4-216ENST00000490895 ARID2Q68CP9 1835 aa17.08■□□□□ 0.33
IMP4-216ENST00000490895 HIDE1A8MVS5 230 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 SPATA31C1P0DKV0 1188 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 ARL2P36404 184 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 PTENP60484 403 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.32
IMP4-216ENST00000490895 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.32
IMP4-216ENST00000490895 UBXN11Q5T124 520 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 TMEM184AQ6ZMB5 413 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
IMP4-216ENST00000490895 CARNS1A5YM72 827 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
IMP4-216ENST00000490895 ALADP13716 330 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
IMP4-216ENST00000490895 TFDP1Q14186 410 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 TMEM173Q86WV6 379 aaPredicted RBP17.07■□□□□ 0.32
IMP4-216ENST00000490895 MRPL43Q8N983 215 aaKnown RBP17.07■□□□□ 0.32
IMP4-216ENST00000490895 ASAP3Q8TDY4 903 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 RAPGEFL1Q9UHV5 662 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
IMP4-216ENST00000490895 USP15Q9Y4E8 981 aaPredicted RBP17.07■□□□□ 0.32
IMP4-216ENST00000490895 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms