RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 ATG2AQ2TAZ0 1938 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 CCT6AP40227 531 aaKnown RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 CSPP1Q1MSJ5 1256 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 AAK1Q2M2I8 961 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 TWF2Q6IBS0 349 aaKnown RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 DTHD1Q6ZMT9 781 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 LRRC43Q8N309 656 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 KLHL23Q8NBE8 558 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 SPPL3Q8TCT6 385 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 POLR3FQ9H1D9 316 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 NSUN3Q9H649 340 aaKnown RBP16.9■□□□□ 0.3
COL27A1-206ENST00000490831 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 FAM105AQ9NUU6 356 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
COL27A1-206ENST00000490831 LAG3P18627 525 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 CYP11B2P19099 503 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 PDCP20941 246 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 AXLP30530 894 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 UBE3AQ05086 875 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 MBTD1Q05BQ5 628 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 AMHR2Q16671 573 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 ARL6IP4Q66PJ3 421 aaKnown RBP16.89■□□□□ 0.29
COL27A1-206ENST00000490831 PADI6Q6TGC4 694 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 MRPL10Q7Z7H8 261 aaKnown RBP16.89■□□□□ 0.29
COL27A1-206ENST00000490831 ABI1Q8IZP0 508 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 COLGALT1Q8NBJ5 622 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 MMTAG2Q9BU76 263 aaKnown RBP16.89■□□□□ 0.29
COL27A1-206ENST00000490831 ALG13Q9NP73 1137 aaKnown RBP16.89■□□□□ 0.29
COL27A1-206ENST00000490831 HCSTQ9UBK5 93 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
COL27A1-206ENST00000490831 ARHGEF35A5YM69 484 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 TSPAN1O60635 241 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 DNAJB1P25685 340 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 TFF2Q03403 129 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 TCEAL5Q5H9L2 206 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 CDCA2Q69YH5 1023 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-206ENST00000490831 KCTD17Q8N5Z5 321 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 MRPL9Q9BYD2 267 aaKnown RBP16.88■□□□□ 0.29
COL27A1-206ENST00000490831 GPRC5CQ9NQ84 441 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 KIAA1024Q9UPX6 916 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 PCDHB2Q9Y5E7 798 aa16.88■□□□□ 0.29
COL27A1-206ENST00000490831 PP2D1A8MPX8 630 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 NCK2O43639 380 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 ERLIN2O94905 339 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 BMP1P13497 986 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 PLCB3Q01970 1234 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 HYIQ5T013 277 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
COL27A1-206ENST00000490831 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 RNF169Q8NCN4 708 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 HELQQ8TDG4 1101 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 SNX21Q969T3 373 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 UBE2ZQ9H832 354 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-206ENST00000490831 DDX19AQ9NUU7 478 aaKnown RBP16.87■□□□□ 0.29
COL27A1-206ENST00000490831 LZTS1Q9Y250 596 aa16.87■□□□□ 0.29
COL27A1-206ENST00000490831 MEIS3P2A8K0S8 358 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 K7ELQ4 463 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-206ENST00000490831 FGF18O76093 207 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 EYA4O95677 639 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 BMP15O95972 392 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
COL27A1-206ENST00000490831 FAM187BQ17R55 369 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 NOTUMQ6P988 496 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 AGMOQ6ZNB7 445 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 LPPQ93052 612 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 PABPC5Q96DU9 382 aaKnown RBP16.86■□□□□ 0.29
COL27A1-206ENST00000490831 DNM3Q9UQ16 869 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 CNTNAP2Q9UHC6 1331 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 PLXNA4Q9HCM2 1894 aa16.86■□□□□ 0.29
COL27A1-206ENST00000490831 MUC3AQ02505 3323 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 OFD1O75665 1012 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 ARF4P18085 180 aaPredicted RBP16.85■□□□□ 0.29
COL27A1-206ENST00000490831 SYT1P21579 422 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 CDC25AP30304 524 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 PPM1AP35813 382 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 NAMPTP43490 491 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
COL27A1-206ENST00000490831 CTC1Q2NKJ3 1217 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 THNSL1Q8IYQ7 743 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 SMG8Q8ND04 991 aaKnown RBP16.85■□□□□ 0.29
COL27A1-206ENST00000490831 CNNM3Q8NE01 707 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms