RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 XBP1P17861 261 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 PSMC5P62195 406 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 SSRP1Q08945 709 aaKnown RBP13.21□□□□□ -0.29
FDPS-215ENST00000490140 RARS2Q5T160 578 aaKnown RBP13.21□□□□□ -0.29
FDPS-215ENST00000490140 CCDC149Q6ZUS6 474 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 ZNF668Q96K58 619 aaPredicted RBP13.21□□□□□ -0.29
FDPS-215ENST00000490140 NLRP4Q96MN2 994 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
FDPS-215ENST00000490140 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
FDPS-215ENST00000490140 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 SSX2IPQ9Y2D8 614 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
FDPS-215ENST00000490140 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 A0A087WZ62 844 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 IGKV6-21A0A0C4DH24 114 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
FDPS-215ENST00000490140 ZNF623O75123 536 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 CDKL5O76039 1030 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 GCFC2P16383 781 aaKnown RBP13.2□□□□□ -0.3
FDPS-215ENST00000490140 FGFR4P22455 802 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 CYP3A7P24462 503 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
FDPS-215ENST00000490140 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
FDPS-215ENST00000490140 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
FDPS-215ENST00000490140 NTRK3Q16288 839 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
FDPS-215ENST00000490140 UBN1Q9NPG3 1134 aa13.2□□□□□ -0.3
FDPS-215ENST00000490140 DDX25Q9UHL0 483 aaKnown RBP13.2□□□□□ -0.3
FDPS-215ENST00000490140 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 NT5C1B-RDH14C9J2C7 533 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 NR1I2O75469 434 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 CPA1P15085 419 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 PDIA3P30101 505 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 RFC5P40937 340 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 EVCP57679 992 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 CNNM3Q8NE01 707 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 TMEM175Q9BSA9 504 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
FDPS-215ENST00000490140 RIF1Q5UIP0 2472 aaKnown RBP13.19□□□□□ -0.3
FDPS-215ENST00000490140 MYO10Q9HD67 2058 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 CCDC194A0A1B0GVG4 234 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 MARCH6O60337 910 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
FDPS-215ENST00000490140 ERLIN2O94905 339 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 TDP2O95551 362 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 BRD1O95696 1058 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 URODP06132 367 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 GALTP07902 379 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 KLRC2P26717 231 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 CLCN5P51795 746 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 FOXK2Q01167 660 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
FDPS-215ENST00000490140 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 ETNPPLQ8TBG4 499 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 STAMQ92783 540 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 FAM20AQ96MK3 541 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
FDPS-215ENST00000490140 MRPL17Q9NRX2 175 aaKnown RBP13.18□□□□□ -0.3
FDPS-215ENST00000490140 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
FDPS-215ENST00000490140 FAM186AA6NE01 2351 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 DENND4AQ7Z401 1863 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 H0Y858 1186 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 ASAP2O43150 1006 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 ADH1AP07327 375 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 EPCAMP16422 314 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 PPP2R5CQ13362 524 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 DRP2Q13474 957 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 LPPQ93052 612 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms