RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 KIAA1671Q9BY89 1806 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 LINC01565O15544 149 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 GLP2RO95838 553 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 ERVFC1P60507 584 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 ZP2Q05996 745 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 LAMTOR4Q0VGL1 99 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 COASYQ13057 564 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 SRGAP1Q7Z6B7 1085 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 GJD3Q8N144 294 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 FBXO18Q8NFZ0 1043 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 PSPC1Q8WXF1 523 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 DYDC2Q96IM9 177 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 ZSCAN31Q96LW9 406 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 TMEM60Q9H2L4 133 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 MINDY3Q9H8M7 445 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 CLDND1Q9NY35 253 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 COL4A3BPQ9Y5P4 624 aa10.87□□□□□ -0.67
TMEM39A-210ENST00000490099 MBTPS2O43462 519 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 NEMFO60524 1076 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SKIP12755 728 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SFPQP23246 707 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 ARL2P36404 184 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SMAD4Q13485 552 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 CTTNQ14247 550 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 PCBP1Q15365 356 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 CALCRLQ16602 461 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 DUSP6Q16828 381 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 UBXN11Q5T124 520 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 IER5LQ5T953 404 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 NCAPH2Q6IBW4 605 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 TPH2Q8IWU9 490 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 ADHFE1Q8IWW8 467 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 MRPS27Q92552 414 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 TMEM143Q96AN5 459 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 CDCA3Q99618 268 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 TLR9Q9NR96 1032 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SH2B1Q9NRF2 756 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 SPG21Q9NZD8 308 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 FAM50BQ9Y247 325 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 PCDHGC5Q9Y5F6 944 aa10.86□□□□□ -0.67
TMEM39A-210ENST00000490099 INPPL1O15357 1258 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 MARCH6O60337 910 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 GPR37L1O60883 481 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 OFD1O75665 1012 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 PPM1AP35813 382 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 NRIP1P48552 1158 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 RARRES1P49788 294 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 RAB27AP51159 221 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 PTENP60484 403 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 CYP4A11Q02928 519 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 TRIM29Q14134 588 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 EMC2Q15006 297 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 C4orf32Q8N8J7 132 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 MRPL43Q8N983 215 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 SMRP1Q8NCR6 262 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 VN1R2Q8NFZ6 395 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 NLRP4Q96MN2 994 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 SCLT1Q96NL6 688 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 NFKBIZQ9BYH8 718 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 TLE6Q9H808 572 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 NGRNQ9NPE2 291 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 PUF60Q9UHX1 559 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 CD207Q9UJ71 328 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
TMEM39A-210ENST00000490099 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 DGAT1O75907 488 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 SRGAP2CP0DJJ0 459 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.673e-9■■■□□ 18.7
TMEM39A-210ENST00000490099 TXKP42681 527 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 TRAPPC10P48553 1259 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 HMGN5P82970 282 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 SAFBQ15424 915 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 AMHR2Q16671 573 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 AGMOQ6ZNB7 445 aa10.84□□□□□ -0.67
TMEM39A-210ENST00000490099 CATSPER4Q7RTX7 472 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms