RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 DIS3L2Q8IYB7 885 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 A0A087WZ62 844 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 TBX3O15119 743 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 NCK2O43639 380 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CUTAO60888 179 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 ITGB1P05556 798 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 P4HBP07237 508 aaKnown RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 SFPQP23246 707 aaKnown RBP eCLIP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 NPEPPSP55786 919 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CLUL1Q15846 466 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 LEXMQ3ZCV2 418 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 P2RX5Q93086 422 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 PABPC5Q96DU9 382 aaKnown RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 DYDC2Q96IM9 177 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 LXNQ9BS40 222 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CBX8Q9HC52 389 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 KCNMB3Q9NPA1 279 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 TYW1Q9NV66 732 aaKnown RBP13.08□□□□□ -0.32
GGPS1-207ENST00000489692 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 FAM50BQ9Y247 325 aa13.08□□□□□ -0.32
GGPS1-207ENST00000489692 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 LINC00271P0C7V0 271 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 LAG3P18627 525 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 CA8P35219 290 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 TXKP42681 527 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 NDUFV1P49821 464 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 DSC3Q14574 896 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 EPHA7Q15375 998 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 PUS10Q3MIT2 529 aaKnown RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 RILPL1Q5EBL4 403 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 XKR9Q5GH70 373 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 TWF2Q6IBS0 349 aaKnown RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 ANO5Q75V66 913 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 RBM23Q86U06 439 aaKnown RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 SPPL3Q8TCT6 385 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 HAS1Q92839 578 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 RGL1Q9NZL6 768 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
GGPS1-207ENST00000489692 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
GGPS1-207ENST00000489692 NEMFO60524 1076 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 IL9P15248 144 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 YWHABP31946 246 aaKnown RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 RFC5P40937 340 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF165P49910 485 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 HYAL1Q12794 435 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 ZNF410Q86VK4 478 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
GGPS1-207ENST00000489692 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
GGPS1-207ENST00000489692 TRANK1O15050 2925 aa13.05□□□□□ -0.32
GGPS1-207ENST00000489692 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms