RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EIF2AK1Q9BQI3 630 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 SH2D3AQ9BRG2 576 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 DHX33Q9H6R0 707 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 DACT1Q9NYF0 836 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 RGL1Q9NZL6 768 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 WRAP73Q9P2S5 460 aaPredicted RBP11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 TRANK1O15050 2925 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 A0A0C4DFX4 3053 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 RALGAPA2Q2PPJ7 1873 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 EVPLQ92817 2033 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 CUL9Q8IWT3 2517 aa11.74□□□□□ -0.53
SCAMP4-208ENST00000489554 A0A087WZ62 844 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 SLITRK3O94933 977 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 LYPLA2O95372 231 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 PFKFB1P16118 471 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 CYP4A11Q02928 519 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 TFF2Q03403 129 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 SNW1Q13573 536 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 ECM1Q16610 540 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 XKR9Q5GH70 373 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 ZNF668Q96K58 619 aaPredicted RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 AK8Q96MA6 479 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 HSD17B14Q9BPX1 270 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 AAASQ9NRG9 546 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 COL4A3BPQ9Y5P4 624 aa11.73□□□□□ -0.53
SCAMP4-208ENST00000489554 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 GRM6O15303 877 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 ASAP2O43150 1006 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 EOMESO95936 686 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 GATMP50440 423 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 NDUFA8P51970 172 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 EMC2Q15006 297 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 E2F4Q16254 413 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 HYIQ5T013 277 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 ADAMTS19Q8TE59 1207 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 MRPS27Q92552 414 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 UBE2ZQ9H832 354 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 PLAGL2Q9UPG8 496 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 LOXHD1Q8IVV2 1947 aa11.72□□□□□ -0.53
SCAMP4-208ENST00000489554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 NCK2O43639 380 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TRAK2O60296 914 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 MED24O75448 989 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 NR1I2O75469 434 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 FGFR1P11362 822 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 SKIP12755 728 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 BMP1P13497 986 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 FGFR4P22455 802 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TMEM119Q4V9L6 283 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TCEAL5Q5H9L2 206 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 KCNK18Q7Z418 384 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 SRGAP1Q7Z6B7 1085 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 ABI1Q8IZP0 508 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 KLHL23Q8NBE8 558 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 RSPH1Q8WYR4 309 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TMEM143Q96AN5 459 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 UHRF1Q96T88 793 aaPredicted RBP11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 MTRQ99707 1265 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 NLRC5Q86WI3 1866 aa11.71□□□□□ -0.53
SCAMP4-208ENST00000489554 ACTN4O43707 911 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 CSDE1O75534 798 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 DGAT1O75907 488 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 ITGB1P05556 798 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 LAG3P18627 525 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 RAB27AP51159 221 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 KCNQ1P51787 676 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 UBE3AQ05086 875 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms