RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 C12orf56Q8IXR9 622 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 REPS2Q8NFH8 660 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 ZNF296Q8WUU4 475 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-208ENST00000489537 DYDC2Q96IM9 177 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 FAM167AQ96KS9 214 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 ACCSQ96QU6 501 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 MED15Q96RN5 788 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 REEP2Q9BRK0 252 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 MOV10L1Q9BXT6 1211 aaKnown RBP6.98□□□□□ -1.29
SF3A3-208ENST00000489537 GBP3Q9H0R5 595 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 UNC45AQ9H3U1 944 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 PLCB1Q9NQ66 1216 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 ABHD10Q9NUJ1 306 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 INTS13Q9NVM9 706 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 SLC5A4Q9NY91 659 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 CYP39A1Q9NYL5 469 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 MAPK8IP1Q9UQF2 711 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 PPP2R2CQ9Y2T4 447 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 R3HCC1Q9Y3T6 440 aaKnown RBP6.98□□□□□ -1.29
SF3A3-208ENST00000489537 PCDHA2Q9Y5H9 948 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 SNCAIPQ9Y6H5 919 aa6.98□□□□□ -1.29
SF3A3-208ENST00000489537 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ASB14A6NK59 587 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SPATA31C2B4DYI2 1134 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CA12O43570 354 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CHMP2AO43633 222 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 STRNO43815 780 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 GFPT2O94808 682 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 GYPCP04921 128 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ARP10275 920 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CETPP11597 493 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 MYCLP12524 364 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KRT13P13646 458 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 PLS3P13797 630 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SNRPBP14678 240 aaKnown RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 NR2F2P24468 414 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 YWHABP31946 246 aaKnown RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 RFC5P40937 340 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 GCLCP48506 637 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SLC26A2P50443 739 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 GTF2A2P52657 109 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ADKP55263 362 aaKnown RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CYP4A11Q02928 519 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 DMP1Q13316 513 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 PLS1Q14651 629 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KCTD2Q14681 263 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 MEA1Q16626 185 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 XKR3Q5GH77 459 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 E4F1Q66K89 784 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 LRRC55Q6ZSA7 311 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 INTS8Q75QN2 995 aaKnown RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ZNF720Q7Z2F6 126 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KCNK18Q7Z418 384 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SFR1Q86XK3 245 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SYCP3Q8IZU3 236 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ABRAQ8N0Z2 381 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ARMC2Q8NEN0 867 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SCFD1Q8WVM8 642 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KCNN1Q92952 543 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 WNK4Q96J92 1243 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 PPP1R13BQ96KQ4 1090 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 IFT74Q96LB3 600 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CCDC42Q96M95 316 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 C16orf45Q96MC5 204 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 TAAR1Q96RJ0 339 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KCTD10Q9H3F6 313 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SEMA6BQ9H3T3 888 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 KIAA1586Q9HCI6 787 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 JPH1Q9HDC5 661 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-208ENST00000489537 HOMER2Q9NSB8 354 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 NRBP2Q9NSY0 501 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SAGE1Q9NXZ1 904 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 CEP72Q9P209 647 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 SLC9A2Q9UBY0 812 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 LOXHD1Q8IVV2 1947 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ATP8B3O60423 1300 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 ZSWIM8A7E2V4 1837 aa6.97□□□□□ -1.29
SF3A3-208ENST00000489537 MYH7BA7E2Y1 1941 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM49BA6NDI0 452 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 EIF3CLB5ME19 914 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 GPR25O00155 361 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 EML1O00423 815 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TERTO14746 1132 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 PMM2O15305 246 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 DHX15O43143 795 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 TEX33O43247 280 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 AFPP02771 609 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 NR3C1P04150 777 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 CASQ1P31415 396 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 RARRES1P49788 294 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 INSM1Q01101 510 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 NNTQ13423 1086 aa6.96□□□□□ -1.3
SF3A3-208ENST00000489537 CTTNQ14247 550 aaKnown RBP6.96□□□□□ -1.3
SF3A3-208ENST00000489537 ECM1Q16610 540 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms