RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.29
ACTN4-206ENST00000489451 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.3
ACTN4-206ENST00000489451 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 PROB1E7EW31 1015 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 H0Y858 1186 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 CLASP2O75122 1294 aaKnown RBP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 RHPN2Q8IUC4 686 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 ABI1Q8IZP0 508 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 AUTS2Q8WXX7 1259 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 C22orf23Q9BZE7 217 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 ZBP1Q9H171 429 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 NRDE2Q9H7Z3 1164 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 TBC1D13Q9NVG8 400 aa13.2□□□□□ -0.3
ACTN4-206ENST00000489451 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
ACTN4-206ENST00000489451 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 BAHCC1Q9P281 2608 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 OFD1O75665 1012 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 PSMC5P62195 406 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
ACTN4-206ENST00000489451 LETM2Q2VYF4 491 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 KRT25Q7Z3Z0 450 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
ACTN4-206ENST00000489451 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 CHST12Q9NRB3 414 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 FAM105AQ9NUU6 356 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 PUF60Q9UHX1 559 aaKnown RBP13.19□□□□□ -0.3
ACTN4-206ENST00000489451 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
ACTN4-206ENST00000489451 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
ACTN4-206ENST00000489451 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 WNT7AO00755 349 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 CPLX1O14810 134 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 ZBTB39O15060 712 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 ZNF623O75123 536 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 GALTP07902 379 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 SLC11A1P49279 550 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 VCPP55072 806 aaKnown RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 KRT17Q04695 432 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 UBXN11Q5T124 520 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 AGMOQ6ZNB7 445 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 IGSF21Q96ID5 467 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 MRPL9Q9BYD2 267 aaKnown RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 SMOC2Q9H3U7 446 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
ACTN4-206ENST00000489451 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
ACTN4-206ENST00000489451 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 PFKFB2O60825 505 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 DDHD2O94830 711 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 LARGE1O95461 756 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 EPCAMP16422 314 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 HOXB8P17481 243 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 QARSP47897 775 aaKnown RBP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 SIGLEC14Q08ET2 396 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 NOMO2Q5JPE7 1267 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-206ENST00000489451 SLC22A17Q8WUG5 538 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 CASP10Q92851 521 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 TMEM143Q96AN5 459 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 ADAM7Q9H2U9 754 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 RGL1Q9NZL6 768 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms