RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RNF207Q6ZRF8 634 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 Q6ZS52 159 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 FAM160B2Q86V87 743 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 GMCL1P1Q8NEA9 526 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 TMEM169Q96HH4 297 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 USP44Q9H0E7 712 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 MKNK2Q9HBH9 465 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 POLMQ9NP87 494 aaPredicted RBP8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 ABCA7Q8IZY2 2146 aa8.84□□□□□ -0.99
EXOSC3-206ENST00000489414 C9IYK1 514 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 RHOBTB1O94844 696 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 AFPP02771 609 aaKnown RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 LGALS2P05162 132 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 KRT10P13645 584 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 NDUFV2P19404 249 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 TNFRSF8P28908 595 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 MAPK8P45983 427 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 PXNP49023 591 aaPredicted RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 PAK2Q13177 524 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 PKDCCQ504Y2 493 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 DDX53Q86TM3 631 aaKnown RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 RSPH3Q86UC2 560 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 TMEM173Q86WV6 379 aaPredicted RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 CHURC1Q8WUH1 139 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 SDR42E1Q8WUS8 393 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 STAG1Q8WVM7 1258 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 SPATA33Q96N06 139 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 EMILIN2Q9BXX0 1053 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 COPRSQ9NQ92 184 aa8.83□□□□□ -1
EXOSC3-206ENST00000489414 EVLQ9UI08 416 aaPredicted RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
EXOSC3-206ENST00000489414 IGSF9BQ9UPX0 1349 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 NT5C1B-RDH14C9J2C7 533 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 B4GALT3O60512 393 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 PLA2G6O60733 806 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 FSHRP23945 695 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
EXOSC3-206ENST00000489414 CXADRP78310 365 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 MRPS6P82932 125 aaKnown RBP8.82□□□□□ -1
EXOSC3-206ENST00000489414 TOGARAM2Q6ZUX3 1019 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 SLC24A5Q71RS6 500 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 ZNF280BQ86YH2 543 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 CLEC4DQ8WXI8 215 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 TTC9Q92623 222 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 FGF13Q92913 245 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 MKL1Q969V6 931 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 CRNKL1Q9BZJ0 848 aaKnown RBP8.82□□□□□ -1
EXOSC3-206ENST00000489414 PIDD1Q9HB75 910 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 ATP6V0A4Q9HBG4 840 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 RGS18Q9NS28 235 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 C1orf112Q9NSG2 853 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 RBM12Q9NTZ6 932 aaKnown RBP8.82□□□□□ -1
EXOSC3-206ENST00000489414 RNF19AQ9NV58 838 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 TMEM161AQ9NX61 479 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 SYNPO2Q9UMS6 1093 aa8.82□□□□□ -1
EXOSC3-206ENST00000489414 HIVEP1P15822 2718 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 RRP8O43159 456 aaKnown RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 TLX3O43711 291 aaPredicted RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 VAMP4O75379 141 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 ZMYND10O75800 440 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 IDH1O75874 414 aaKnown RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 C8AP07357 584 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 LRRC32Q14392 662 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 WDR44Q5JSH3 913 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 MARCH9Q86YJ5 346 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 DNAJB3Q8WWF6 145 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 NT5C3AQ9H0P0 336 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 ELAC1Q9H777 363 aaKnown RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 CLIP2Q9UDT6 1046 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 DPP7Q9UHL4 492 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 HEMK1Q9Y5R4 338 aaPredicted RBP8.81□□□□□ -1
EXOSC3-206ENST00000489414 MRVI1Q9Y6F6 885 aa8.81□□□□□ -1
EXOSC3-206ENST00000489414 CYP2D7A0A087X1C5 515 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 BLACEA4D250 179 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 ECI2O75521 394 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 ENGP17813 658 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 ZAP70P43403 619 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 FAM189BP81408 668 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 TLE3Q04726 772 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 IKQ13123 557 aaPredicted RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 CELF3Q5SZQ8 465 aaKnown RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 C12orf60Q5U649 245 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 SLFN13Q68D06 897 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 ELMSAN1Q6PJG2 1045 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 TMED8Q6PL24 325 aaPredicted RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 SLCO6A1Q86UG4 719 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 TICAM1Q8IUC6 712 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 ADAM2Q99965 735 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 VN1R3Q9BXE9 311 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 PLA2G2FQ9BZM2 168 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 APOBEC2Q9Y235 224 aaKnown RBP8.8□□□□□ -1
EXOSC3-206ENST00000489414 THADAQ6YHU6 1953 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 KNTC1P50748 2209 aa8.8□□□□□ -1
EXOSC3-206ENST00000489414 NBASA2RRP1 2371 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 PDCD11Q14690 1871 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms