RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 GGT7Q9UJ14 662 aa12.71□□□□□ -0.37
SMTN-218ENST00000489337 ATP8A1Q9Y2Q0 1164 aa12.71□□□□□ -0.37
SMTN-218ENST00000489337 CHN1P15882 459 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 ASTE1Q2TB18 679 aaPredicted RBP12.71□□□□□ -0.38
SMTN-218ENST00000489337 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 CHADLQ6NUI6 762 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 P2RX7Q99572 595 aaKnown RBP12.71□□□□□ -0.38
SMTN-218ENST00000489337 AMACRQ9UHK6 382 aa12.71□□□□□ -0.38
SMTN-218ENST00000489337 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.38
SMTN-218ENST00000489337 EIF1ADQ8N9N8 165 aaKnown RBP12.7□□□□□ -0.38
SMTN-218ENST00000489337 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 RPAP3Q9H6T3 665 aaPredicted RBP12.7□□□□□ -0.38
SMTN-218ENST00000489337 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SLC12A4Q9UP95 1085 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 STK38LQ9Y2H1 464 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 ASNSP08243 561 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 RWDD2BP57060 319 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 KCNJ2P63252 427 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 C4orf32Q8N8J7 132 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 AK8Q96MA6 479 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 LRRC27Q9C0I9 530 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 KRIT1O00522 736 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 CAND2O75155 1236 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SMNDC1O75940 238 aaKnown RBP eCLIP12.7□□□□□ -0.382e-7■■■■■ 28.4
SMTN-218ENST00000489337 IFNAR2P48551 515 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 LRRC34Q8IZ02 419 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 PRCCQ92733 491 aaPredicted RBP12.7□□□□□ -0.38
SMTN-218ENST00000489337 DCPSQ96C86 337 aaKnown RBP12.7□□□□□ -0.38
SMTN-218ENST00000489337 GMLQ99445 158 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
SMTN-218ENST00000489337 SNUPNO95149 360 aaKnown RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 KIF4AO95239 1232 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 MYBP10242 640 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 KCNK18Q7Z418 384 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 TMC3Q7Z5M5 1100 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 LDHDQ86WU2 507 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 LZTS2Q9BRK4 669 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 PACSIN1Q9BY11 444 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 HOMER3Q9NSC5 361 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ABCF3Q9NUQ8 709 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 PCDHGC5Q9Y5F6 944 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ENTPD3O75355 529 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 SERPING1P05155 500 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 LRRC4CQ9HCJ2 640 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 F8VZ95 297 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 POLR2FP61218 127 aaKnown RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 ARHGAP4P98171 946 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 LRRC15Q8TF66 581 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 KLHL29Q96CT2 875 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
SMTN-218ENST00000489337 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
SMTN-218ENST00000489337 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 A0A087X0T9 212 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 UBOX5O94941 541 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 FAM228BP0C875 321 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 LMNB1P20700 586 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 SEMA3FQ13275 785 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 ITIH4Q14624 930 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 TMEM59LQ9UK28 342 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
SMTN-218ENST00000489337 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 GOLGA6L10A0A0M3HER8 536 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 ASAP2O43150 1006 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 TTI1O43156 1089 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 EVI5O60447 810 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 UPP2O95045 317 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 KLHL30Q0D2K2 578 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 KIF2BQ8N4N8 673 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 UTP11Q9Y3A2 253 aaKnown RBP12.68□□□□□ -0.38
SMTN-218ENST00000489337 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMTN-218ENST00000489337 CCND1P24385 295 aa12.68□□□□□ -0.38
SMTN-218ENST00000489337 SNX1Q13596 522 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms