RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 H2AFYO75367 372 aaKnown RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 CFBP00751 764 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 KNG1P01042 644 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 CT47B1P0C2W7 299 aaPredicted RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 PF4V1P10720 104 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 MC4RP32245 332 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 GPR3P46089 330 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 SLC6A3Q01959 620 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 PDCD1Q15116 288 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 CDSNQ15517 529 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 GFOD2Q3B7J2 385 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 PHF19Q5T6S3 580 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 RTN4RL1Q86UN2 441 aaPredicted RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 C7orf31Q8N865 590 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 SH3RF3Q8TEJ3 882 aaPredicted RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 LMBR1Q8WVP7 490 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 RTF1Q92541 710 aaKnown RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 TACO1Q9BSH4 297 aaKnown RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 ZDHHC5Q9C0B5 715 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 KLC2Q9H0B6 622 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 ZMAT4Q9H898 229 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 PNMA8BQ9ULN7 279 aaPredicted RBP5.61□□□□□ -1.51
XRN1-213ENST00000489241 ZDHHC9Q9Y397 364 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 LCHNA4D1U4 455 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA8AA7E2F4 631 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA8BA8MQT2 603 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 MPIG6BO95866 241 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 IL18BPO95998 194 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 MYL1P05976 194 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 APEX1P27695 318 aaKnown RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 SELENOPP49908 381 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 PRAMEF9Q5VWM5 478 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 SLFN12LQ6IEE8 588 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 ESRP1Q6NXG1 681 aaKnown RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 Q6ZUG5 572 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 ESPNLQ6ZVH7 1005 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 PNMA8AQ86V59 439 aaPredicted RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 DGKHQ86XP1 1220 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 REXO1L1PQ8IX06 675 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 STPG3Q8N7X2 389 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
XRN1-213ENST00000489241 SLC39A13Q96H72 371 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 AMNQ9BXJ7 453 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 CHST12Q9NRB3 414 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 KCND1Q9NSA2 647 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 OBP2AQ9NY56 170 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 GIT1Q9Y2X7 761 aa5.6□□□□□ -1.51
XRN1-213ENST00000489241 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 PATE3B3GLJ2 98 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 H0Y858 1186 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 PRPF6O94906 941 aaKnown RBP5.59□□□□□ -1.51
XRN1-213ENST00000489241 CNOT4O95628 575 aaKnown RBP5.59□□□□□ -1.51
XRN1-213ENST00000489241 PRLP01236 227 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 BIRC2Q13490 618 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.51
XRN1-213ENST00000489241 SPRED1Q7Z699 444 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 IFNL2Q8IZJ0 200 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 MORC4Q8TE76 937 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 AJUBAQ96IF1 538 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 RPS6KC1Q96S38 1066 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 PTPN18Q99952 460 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 OR10A5Q9H207 317 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 DEF6Q9H4E7 631 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 MYH16Q9H6N6 1097 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 SEC61A2Q9H9S3 476 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 SRRDQ9UH36 339 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 FBXO10Q9UK96 956 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 TCAF1Q9Y4C2 921 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 SLC4A7Q9Y6M7 1214 aa5.59□□□□□ -1.51
XRN1-213ENST00000489241 PLIN1O60240 522 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 KDM1AO60341 852 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 APOL3O95236 402 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 U2AF1L5P0DN76 240 aaPredicted RBP5.58□□□□□ -1.52
XRN1-213ENST00000489241 C6P13671 934 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 TACR2P21452 398 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 LPOP22079 712 aaPredicted RBP5.58□□□□□ -1.52
XRN1-213ENST00000489241 CSF2RBP32927 897 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 BCAR1P56945 870 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 IL13RA1P78552 427 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 U2AF1Q01081 240 aaKnown RBP eCLIP5.58□□□□□ -1.52
XRN1-213ENST00000489241 ADCY2Q08462 1091 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 MAP3K12Q12852 859 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 STILQ15468 1287 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 SYCP2LQ5T4T6 812 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 ZNF585AQ6P3V2 769 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 SLC4A10Q6U841 1118 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 EXOC8Q8IYI6 725 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 HSPBAP1Q96EW2 488 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 ZNF496Q96IT1 587 aaPredicted RBP5.58□□□□□ -1.52
XRN1-213ENST00000489241 ACAP3Q96P50 834 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 SEMA4AQ9H3S1 761 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 ANLNQ9NQW6 1124 aa5.58□□□□□ -1.52
XRN1-213ENST00000489241 MRFAP1Q9Y605 127 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms