RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SMC3Q9UQE7 1217 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 H3BQV1 296 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 FGF18O76093 207 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 ERLIN2O94905 339 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 SKIP12755 728 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 RPA1P27694 616 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 IRS1P35568 1242 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 PBX3P40426 434 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 FXR2P51116 673 aaKnown RBP eCLIP19.73■□□□□ 0.752e-7■■□□□ 11.5
ITGB1-215ENST00000488494 HYAL1Q12794 435 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 PTGDRQ13258 359 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 TFDP1Q14186 410 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 CSPP1Q1MSJ5 1256 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 EP400NLQ6ZTU2 488 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 PABPC5Q96DU9 382 aaKnown RBP19.73■□□□□ 0.75
ITGB1-215ENST00000488494 DBR1Q9UK59 544 aaKnown RBP19.73■□□□□ 0.75
ITGB1-215ENST00000488494 PCDHGC5Q9Y5F6 944 aa19.73■□□□□ 0.75
ITGB1-215ENST00000488494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.72■□□□□ 0.75
ITGB1-215ENST00000488494 MEIS3P2A8K0S8 358 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 XRCC6P12956 609 aaKnown RBP eCLIP19.72■□□□□ 0.75
ITGB1-215ENST00000488494 GLRA2P23416 452 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 ARL2P36404 184 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 CCT6AP40227 531 aaKnown RBP19.72■□□□□ 0.75
ITGB1-215ENST00000488494 COL19A1Q14993 1142 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 MAEAQ7L5Y9 396 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 ZNF558Q96NG5 402 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 NACC1Q96RE7 527 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 MRPL9Q9BYD2 267 aaKnown RBP19.72■□□□□ 0.75
ITGB1-215ENST00000488494 GPRC5CQ9NQ84 441 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 CLDND1Q9NY35 253 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 LRWD1Q9UFC0 647 aa19.72■□□□□ 0.75
ITGB1-215ENST00000488494 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.72■□□□□ 0.75
ITGB1-215ENST00000488494 ARHGEF35A5YM69 484 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 H3BQ06 376 aaPredicted RBP19.71■□□□□ 0.75
ITGB1-215ENST00000488494 INO80B-WBP1J3KQ70 363 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 TNFRSF10AO00220 468 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 TSPAN1O60635 241 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 HOXA11P31270 313 aaPredicted RBP19.71■□□□□ 0.75
ITGB1-215ENST00000488494 GTF2F1P35269 517 aaKnown RBP eCLIP19.71■□□□□ 0.751e-12■■■■■ 49.4
ITGB1-215ENST00000488494 PTENP60484 403 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 MBTD1Q05BQ5 628 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 LEXMQ3ZCV2 418 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 GLB1LQ6UWU2 654 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 ADGRD2Q7Z7M1 963 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 MCPH1Q8NEM0 835 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 TLR9Q9NR96 1032 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.71■□□□□ 0.75
ITGB1-215ENST00000488494 INPP5FQ9Y2H2 1132 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 PCDHB2Q9Y5E7 798 aa19.71■□□□□ 0.75
ITGB1-215ENST00000488494 PP2D1A8MPX8 630 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 LAD1O00515 517 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 PPM1AP35813 382 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 UBE3AQ05086 875 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 RILPL1Q5EBL4 403 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 PADI6Q6TGC4 694 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 KCNT2Q6UVM3 1135 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 IFNLR1Q8IU57 520 aaPredicted RBP19.7■□□□□ 0.74
ITGB1-215ENST00000488494 SNX29Q8TEQ0 813 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 PPP2R3CQ969Q6 453 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 IGFLR1Q9H665 355 aa19.7■□□□□ 0.74
ITGB1-215ENST00000488494 TCF20Q9UGU0 1960 aaKnown RBP19.7■□□□□ 0.74
ITGB1-215ENST00000488494 LRRIQ4A6NIV6 560 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 ZNF623O75123 536 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 PRPHP41219 470 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 ECM1Q16610 540 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 UBXN11Q5T124 520 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 IGSF22Q8N9C0 903 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 PGBD4Q96DM1 585 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 CPB2Q96IY4 423 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 MYO7AQ13402 2215 aa19.69■□□□□ 0.74
ITGB1-215ENST00000488494 LINC01565O15544 149 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 NCK2O43639 380 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 TBX10O75333 385 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 MUTP22033 750 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 NRIP1P48552 1158 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 POU5F1BQ06416 359 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 PCBP1Q15365 356 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 IL17AQ16552 155 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 AMHR2Q16671 573 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 CTC1Q2NKJ3 1217 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 NOMO2Q5JPE7 1267 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 PTCRAQ6ISU1 281 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 NOTUMQ6P988 496 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 RSPH1Q8WYR4 309 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 MRPS27Q92552 414 aaKnown RBP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 EIF2AQ9BY44 585 aaKnown RBP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 NFKBIZQ9BYH8 718 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 DDX19AQ9NUU7 478 aaKnown RBP19.68■□□□□ 0.74
ITGB1-215ENST00000488494 TBC1D13Q9NVG8 400 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 SPG21Q9NZD8 308 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 KIAA1024Q9UPX6 916 aa19.68■□□□□ 0.74
ITGB1-215ENST00000488494 B4GALT5O43286 388 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 AXLP30530 894 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 ATP2C1P98194 919 aaPredicted RBP19.67■□□□□ 0.74
ITGB1-215ENST00000488494 PLCB3Q01970 1234 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 RNASELQ05823 741 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms