RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MRPL38Q96DV4 380 aaKnown RBP15.78■□□□□ 0.12
COL9A2-208ENST00000488463 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 BHMT2Q9H2M3 363 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 DDX19AQ9NUU7 478 aaKnown RBP15.78■□□□□ 0.12
COL9A2-208ENST00000488463 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
COL9A2-208ENST00000488463 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 PIN4Q9Y237 131 aaKnown RBP15.78■□□□□ 0.12
COL9A2-208ENST00000488463 RWDD3Q9Y3V2 267 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 STK24Q9Y6E0 443 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 C5orf42Q9H799 3197 aa15.78■□□□□ 0.12
COL9A2-208ENST00000488463 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 E9PMD0 336 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 GRM6O15303 877 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 TSPAN1O60635 241 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 GRIN1Q05586 938 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 PTPAQ15257 358 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 CDCA2Q69YH5 1023 aaPredicted RBP15.77■□□□□ 0.12
COL9A2-208ENST00000488463 MICALL1Q8N3F8 863 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 P2RX5Q93086 422 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 RAB34Q9BZG1 259 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.12
COL9A2-208ENST00000488463 PLAGL2Q9UPG8 496 aa15.77■□□□□ 0.12
COL9A2-208ENST00000488463 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 ARHGEF35A5YM69 484 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 EYA4O95677 639 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 ITGB1P05556 798 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 DNAJB1P25685 340 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 PCBP1Q15365 356 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 KRT79Q5XKE5 535 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 TWF2Q6IBS0 349 aaKnown RBP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 FAM173BQ6P4H8 233 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 MAEAQ7L5Y9 396 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 MRPL10Q7Z7H8 261 aaKnown RBP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 DAW1Q8N136 415 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 CCDC43Q96MW1 224 aaKnown RBP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 C11orf84Q9BUA3 381 aaPredicted RBP15.76■□□□□ 0.11
COL9A2-208ENST00000488463 POLD4Q9HCU8 107 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 FAM105AQ9NUU6 356 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 CLIC4Q9Y696 253 aa15.76■□□□□ 0.11
COL9A2-208ENST00000488463 B4GALT5O43286 388 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 HOXA2O43364 376 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 EDN1P05305 212 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 MAPK7Q13164 816 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 TFDP1Q14186 410 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 COL19A1Q14993 1142 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 TMEM119Q4V9L6 283 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 AGMOQ6ZNB7 445 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 KLHL23Q8NBE8 558 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 SPPL3Q8TCT6 385 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 HELQQ8TDG4 1101 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 LPPQ93052 612 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 LMAN2LQ9H0V9 348 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 FZD8Q9H461 694 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 ALG13Q9NP73 1137 aaKnown RBP15.75■□□□□ 0.11
COL9A2-208ENST00000488463 PCDHB2Q9Y5E7 798 aa15.75■□□□□ 0.11
COL9A2-208ENST00000488463 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 STX6O43752 255 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 BMP15O95972 392 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 ARF4P18085 180 aaPredicted RBP15.74■□□□□ 0.11
COL9A2-208ENST00000488463 RAB27AP51159 221 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 RINT1Q6NUQ1 792 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 C1orf186Q6ZWK4 172 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 KCTD17Q8N5Z5 321 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 COLGALT1Q8NBJ5 622 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 RNF169Q8NCN4 708 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 SMG8Q8ND04 991 aaKnown RBP15.74■□□□□ 0.11
COL9A2-208ENST00000488463 CPB2Q96IY4 423 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 AK8Q96MA6 479 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 EIF2AQ9BY44 585 aaKnown RBP15.74■□□□□ 0.11
COL9A2-208ENST00000488463 CCDC113Q9H0I3 377 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 DNM3Q9UQ16 869 aa15.74■□□□□ 0.11
COL9A2-208ENST00000488463 INO80B-WBP1J3KQ70 363 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 B4GALT3O60512 393 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 OFD1O75665 1012 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 SKIP12755 728 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 AXLP30530 894 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 AFF1P51825 1210 aaKnown RBP15.73■□□□□ 0.11
COL9A2-208ENST00000488463 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 LRRC43Q8N309 656 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 THEGQ9P2T0 379 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 FBXO2Q9UK22 296 aaPredicted RBP15.73■□□□□ 0.11
COL9A2-208ENST00000488463 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
COL9A2-208ENST00000488463 MYH11P35749 1972 aa15.73■□□□□ 0.11
COL9A2-208ENST00000488463 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.72■□□□□ 0.11
COL9A2-208ENST00000488463 A0A1B0GUA9 196 aa15.72■□□□□ 0.11
COL9A2-208ENST00000488463 LRRIQ4A6NIV6 560 aa15.72■□□□□ 0.11
COL9A2-208ENST00000488463 INPPL1O15357 1258 aa15.72■□□□□ 0.11
COL9A2-208ENST00000488463 SLC26A4O43511 780 aa15.72■□□□□ 0.11
COL9A2-208ENST00000488463 ERLIN2O94905 339 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms