RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	CRB3	Q9BUF7	120 aa		4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	C1QTNF3	Q9BXJ4	246 aa		4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	CELF4	Q9BZC1	486 aa	Known RBP	4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	GTPBP4	Q9BZE4	634 aa	Known RBP	4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	GPR27	Q9NS67	375 aa		4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	FBLN5	Q9UBX5	448 aa		4.38	□□□□□ -1.71
HFM1-208	ENST00000488023	MEFV	O15553	781 aa	Predicted RBP	4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	PQBP1	O60828	265 aa	Known RBP	4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	KRT37	O76014	449 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	FUCA1	P04066	466 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	VCAM1	P19320	739 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	KCNAB2	Q13303	367 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	PDCD1	Q15116	288 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	ZNF280D	Q6N043	979 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	CCDC174	Q6PII3	467 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	MMS22L	Q6ZRQ5	1243 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	CCDC149	Q6ZUS6	474 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	OVCH2	Q7RTZ1	564 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	NLRP10	Q86W26	655 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	DCP2	Q8IU60	420 aa	Known RBP	4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	TTC9B	Q8N6N2	239 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	LMBR1	Q8WVP7	490 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	CPA5	Q8WXQ8	436 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	MPP4	Q96JB8	637 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	CCDC138	Q96M89	665 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	C8orf49	Q96NF6	230 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	SAMD11	Q96NU1	681 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	NOX5	Q96PH1	765 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	TBCB	Q99426	244 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	ZFYVE21	Q9BQ24	234 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	ZNF652	Q9Y2D9	606 aa		4.37	□□□□□ -1.71
HFM1-208	ENST00000488023	CCDC66	A2RUB6	948 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	PRSS47	A8MTI9	375 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	ZBED1	O96006	694 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	NAT1	P18440	290 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	TM4SF4	P48230	202 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	RPL11	P62913	178 aa	Known RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	PAK1	Q13153	545 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	KCTD2	Q14681	263 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	TERF2	Q15554	542 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	ELF2	Q15723	593 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	RGL3	Q3MIN7	710 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	ATAT1	Q5SQI0	421 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	L1TD1	Q5T7N2	865 aa	Known RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	LBX2	Q6XYB7	198 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	LDHAL6A	Q6ZMR3	332 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	ZNF761	Q86XN6	746 aa	Predicted RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	SLC41A1	Q8IVJ1	513 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	GRAMD1C	Q8IYS0	662 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	ACRBP	Q8NEB7	543 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	PLEKHO2	Q8TD55	490 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	DIS3L	Q8TF46	1054 aa	Known RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	LOXL4	Q96JB6	756 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	AP5M1	Q9H0R1	490 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	BCAS3	Q9H6U6	928 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	TRMT13	Q9NUP7	481 aa	Known RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	POLH	Q9Y253	713 aa		4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.36	□□□□□ -1.71
HFM1-208	ENST00000488023	WNT9A	O14904	365 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	MYO1B	O43795	1136 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	RNASEH2A	O75792	299 aa	Known RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	NTRK1	P04629	796 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	HSP90AA1	P07900	732 aa	Known RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SLC9A1	P19634	815 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	AKAP5	P24588	427 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	CHKA	P35790	457 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	CACNB2	Q08289	660 aa	Predicted RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	KIAA0753	Q2KHM9	967 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SRGAP1	Q7Z6B7	1085 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	RIOX2	Q8IUF8	465 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	EFHB	Q8N7U6	833 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	C2orf69	Q8N8R5	385 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	C1orf131	Q8NDD1	294 aa	Known RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	PPHLN1	Q8NEY8	458 aa	Known RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	HPS3	Q969F9	1004 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SKA1	Q96BD8	255 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	TMEM169	Q96HH4	297 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SLC2A13	Q96QE2	648 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	ALG1	Q9BT22	464 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	BHMT2	Q9H2M3	363 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	RXFP1	Q9HBX9	757 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	PCDH18	Q9HCL0	1135 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	MARCH2	Q9P0N8	246 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	NTM	Q9P121	344 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SERPINB13	Q9UIV8	391 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	CBLC	Q9ULV8	474 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	hCG_1642624	A0A1W2PR95	340 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	TIMM44	O43615	452 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	RHOBTB3	O94955	611 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	PLAT	P00750	562 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	TNFAIP3	P21580	790 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	C5AR1	P21730	350 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	GRK2	P25098	689 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	SLC6A11	P48066	632 aa		4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	PUM3	Q15397	648 aa	Known RBP	4.35	□□□□□ -1.71
HFM1-208	ENST00000488023	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms