RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 EPM2AIP1Q7L775 607 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 APBB1IPQ7Z5R6 666 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 TMEM161BQ8NDZ6 487 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 NOC3LQ8WTT2 800 aaKnown RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 RWDD2AQ9UIY3 292 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 MCM3APO60318 1980 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 DENND3A2RUS2 1198 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 BECN2A8MW95 431 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 DCDC2CA8MYV0 355 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PDXKO00764 312 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 IKBKBO14920 756 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 CALUO43852 315 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PPP1R37O75864 691 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PARNO95453 639 aaKnown RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 COL6A1P12109 1028 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 BMP6P22004 513 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PRCPP42785 496 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 CRYBB1P53674 252 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 CAPSQ13938 189 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 ANO6Q4KMQ2 910 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SLFN12LQ6IEE8 588 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SYCP3Q8IZU3 236 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 USP38Q8NB14 1042 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 ASAP3Q8TDY4 903 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 TMEM174Q8WUU8 243 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 STRA6Q9BX79 667 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-242ENST00000488013 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 SQORQ9Y6N5 450 aa12.14□□□□□ -0.47
HDLBP-242ENST00000488013 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 SLC16A4O15374 487 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 CCNE1P24864 410 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 GPC3P51654 580 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 MRPS6P82932 125 aaKnown RBP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 MYL5Q02045 173 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 RBL2Q08999 1139 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 SNX17Q15036 470 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 FAM187BQ17R55 369 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 EDRF1Q3B7T1 1238 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 ISM2Q6H9L7 571 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 SLC39A5Q6ZMH5 540 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 P2RX5Q93086 422 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
HDLBP-242ENST00000488013 TRAF3IP3Q9Y228 551 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 GDAQ9Y2T3 454 aa12.13□□□□□ -0.47
HDLBP-242ENST00000488013 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 ACKR2O00590 384 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 GNA14O95837 355 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 PIGRP01833 764 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 VTNP04004 478 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
HDLBP-242ENST00000488013 NMT1P30419 496 aaKnown RBP12.12□□□□□ -0.47
HDLBP-242ENST00000488013 AXLP30530 894 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 FKBP3Q00688 224 aaKnown RBP12.12□□□□□ -0.47
HDLBP-242ENST00000488013 DRP2Q13474 957 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 NFIL3Q16649 462 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 KYAT1Q16773 422 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 TPD52L1Q16890 204 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-242ENST00000488013 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 SPATA1Q5VX52 437 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 KLHL10Q6JEL2 608 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 BSNDQ8WZ55 320 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 CELF4Q9BZC1 486 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms