RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
OPTN-212ENST00000487935 APOL5Q9BWW9 433 aa13.67□□□□□ -0.22
OPTN-212ENST00000487935 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
OPTN-212ENST00000487935 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 CCDC194A0A1B0GVG4 234 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
OPTN-212ENST00000487935 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 CA8P35219 290 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 ANO5Q75V66 913 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 NSUN7Q8NE18 718 aaKnown RBP13.66□□□□□ -0.22
OPTN-212ENST00000487935 FAM20AQ96MK3 541 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
OPTN-212ENST00000487935 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
OPTN-212ENST00000487935 C2orf71A6NGG8 1288 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 EML1O00423 815 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 SLC37A4O43826 429 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 ZC3H11AO75152 810 aaKnown RBP eCLIP13.65□□□□□ -0.22
OPTN-212ENST00000487935 CXCL14O95715 111 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 XBP1P17861 261 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 QARSP47897 775 aaKnown RBP13.65□□□□□ -0.22
OPTN-212ENST00000487935 RAB27AP51159 221 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 SIGLEC14Q08ET2 396 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 PLA2G4FQ68DD2 849 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 CATSPER4Q7RTX7 472 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
OPTN-212ENST00000487935 EXOC8Q8IYI6 725 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 LPPQ93052 612 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 LLPHQ9BRT6 129 aaKnown RBP13.65□□□□□ -0.22
OPTN-212ENST00000487935 PHF20Q9BVI0 1012 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 CYP26B1Q9NR63 512 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 NR2E1Q9Y466 385 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 HCFC2Q9Y5Z7 792 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 TECTAO75443 2155 aa13.65□□□□□ -0.22
OPTN-212ENST00000487935 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
OPTN-212ENST00000487935 ZNF623O75123 536 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 P4HBP07237 508 aaKnown RBP13.64□□□□□ -0.23
OPTN-212ENST00000487935 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
OPTN-212ENST00000487935 MRE11P49959 708 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 FOSBP53539 338 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 NPEPPSP55786 919 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 ITIH3Q06033 890 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 GIT2Q14161 759 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 NOMO2Q5JPE7 1267 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 PPP4R3AQ6IN85 833 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 SLC7A3Q8WY07 619 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 WASF1Q92558 559 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 CEP170P1Q96L14 293 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 NECTIN4Q96NY8 510 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
OPTN-212ENST00000487935 PRRX2Q99811 253 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 NRDE2Q9H7Z3 1164 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 TBC1D13Q9NVG8 400 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 VAV3Q9UKW4 847 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 COL4A3BPQ9Y5P4 624 aa13.64□□□□□ -0.23
OPTN-212ENST00000487935 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 TBX3O15119 743 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 MARCH6O60337 910 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 OFD1O75665 1012 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 EPHA7Q15375 998 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 FBXL6Q8N531 539 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 IGSF21Q96ID5 467 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 IFT122Q9HBG6 1241 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 AGPAT5Q9NUQ2 364 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.63□□□□□ -0.23
OPTN-212ENST00000487935 MUC6Q6W4X9 2439 aa13.63□□□□□ -0.23
OPTN-212ENST00000487935 MEIS3P2A8K0S8 358 aa13.62□□□□□ -0.23
OPTN-212ENST00000487935 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
OPTN-212ENST00000487935 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
OPTN-212ENST00000487935 GALTP07902 379 aa13.62□□□□□ -0.23
OPTN-212ENST00000487935 CTSAP10619 480 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms