RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ADHFE1Q8IWW8 467 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ABI1Q8IZP0 508 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 GJD3Q8N144 294 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 SLC39A11Q8N1S5 342 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PSPC1Q8WXF1 523 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 PRKAG3Q9UGI9 489 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
RAB11FIP3-210ENST00000487899 CITO14578 2027 aa12.52□□□□□ -0.4
RAB11FIP3-210ENST00000487899 EYA4O95677 639 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PPM1AP35813 382 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RARRES1P49788 294 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 COASYQ13057 564 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TRIM29Q14134 588 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 UBXN11Q5T124 520 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 BCL7CQ8WUZ0 217 aaPredicted RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MTRQ99707 1265 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 LLPHQ9BRT6 129 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PCDHA12Q9UN75 941 aa12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HIDE1A8MVS5 230 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PER2O15055 1255 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MARCH6O60337 910 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TSPAN1O60635 241 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZNF623O75123 536 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TXKP42681 527 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RAB27AP51159 221 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 AFF1P51825 1210 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CAPSQ13938 189 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RNF149Q8NC42 400 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ASAP3Q8TDY4 903 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TCF25Q9BQ70 676 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 INO80BQ9C086 356 aaPredicted RBP12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TLE6Q9H808 572 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FAM50BQ9Y247 325 aa12.51□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SRGAP2CP0DJJ0 459 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MCM7P33993 719 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 BCAR1P56945 870 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MBTD1Q05BQ5 628 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 AMHR2Q16671 573 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 AGMOQ6ZNB7 445 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FBXO18Q8NFZ0 1043 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TCP11Q8WWU5 503 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FAM122AQ96E09 287 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CDCA3Q99618 268 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 VN1R3Q9BXE9 311 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZBP1Q9H171 429 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ENTPD7Q9NQZ7 604 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DNAJB4Q9UDY4 337 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 USP15Q9Y4E8 981 aaPredicted RBP12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
RAB11FIP3-210ENST00000487899 FSD2A1L4K1 749 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NT5C1B-RDH14C9J2C7 533 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MED24O75448 989 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 OFD1O75665 1012 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DGAT1O75907 488 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SKIP12755 728 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GLRA2P23416 452 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ARL2P36404 184 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms