RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PCDHGA2Q9Y5H1 932 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 GPR45Q9Y5Y3 372 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 A0A1W2PR48 441 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 C2orf78A6NCI8 922 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 OTOL1A6NHN0 477 aaPredicted RBP7.19□□□□□ -1.26
USP48-209ENST00000487880 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 FSBPO95073 299 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 LY86O95711 162 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 XPAP23025 273 aaPredicted RBP7.19□□□□□ -1.26
USP48-209ENST00000487880 NRG3P56975 720 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 CD69Q07108 199 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 TTF1Q15361 905 aaPredicted RBP7.19□□□□□ -1.26
USP48-209ENST00000487880 PCBP2Q15366 365 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP48-209ENST00000487880 PTPN21Q16825 1174 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 ANO4Q32M45 955 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 USP30Q70CQ3 517 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 CFHR4Q92496 578 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 MKS1Q9NXB0 559 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 INVSQ9Y283 1065 aa7.19□□□□□ -1.26
USP48-209ENST00000487880 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
USP48-209ENST00000487880 MATN2O00339 956 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 B4GALT4O60513 344 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 OSMP13725 252 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 SLC5A3P53794 718 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 EPHB4P54760 987 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 MCL1Q07820 350 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 ZFYVE27Q5T4F4 411 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
USP48-209ENST00000487880 PIK3C3Q8NEB9 887 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 SLC7A6OSQ96CW6 309 aaPredicted RBP7.18□□□□□ -1.26
USP48-209ENST00000487880 ZCCHC4Q9H5U6 513 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 JADE2Q9NQC1 790 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 FAM184BQ9ULE4 1060 aa7.18□□□□□ -1.26
USP48-209ENST00000487880 KLHL33A6NCF5 533 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 TMEM127O75204 238 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 ADCY7P51828 1080 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 ADAM8P78325 824 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 CDK17Q00537 523 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 MEF2AQ02078 507 aaPredicted RBP7.17□□□□□ -1.26
USP48-209ENST00000487880 MGAT5Q09328 741 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 ADRM1Q16186 407 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 ODR4Q5SWX8 454 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 LMBR1LQ6UX01 489 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 JADE3Q92613 823 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 MEGF9Q9H1U4 602 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 SEC61A2Q9H9S3 476 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 NR2E1Q9Y466 385 aa7.17□□□□□ -1.26
USP48-209ENST00000487880 PMS2P1A4D2B8 440 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 S100BP04271 92 aaPredicted RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 CNR2P34972 360 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 PPP2CBP62714 309 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 PPP2CAP67775 309 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 TCIRG1Q13488 830 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 SURF1Q15526 300 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 ZNF568Q3ZCX4 644 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 BTNL9Q6UXG8 535 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 ZBTB46Q86UZ6 589 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 PLA2G15Q8NCC3 412 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 GLB1L3Q8NCI6 653 aaPredicted RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 OR14K1Q8NGZ2 314 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 GCDHQ92947 438 aaPredicted RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 PAWRQ96IZ0 340 aaKnown RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 TEKT5Q96M29 485 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 SLC6A15Q9H2J7 730 aa7.16□□□□□ -1.26
USP48-209ENST00000487880 C14orf93Q9H972 538 aaKnown RBP7.16□□□□□ -1.26
USP48-209ENST00000487880 DAPK3O43293 454 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 MTSS1O43312 755 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 LAMTOR5O43504 91 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 EPHB1P54762 984 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 MALLQ13021 153 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 ODF1Q14990 250 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 CLUL1Q15846 466 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 TMEM240Q5SV17 173 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 ARHGEF18Q6ZSZ5 1173 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 TAS1R1Q7RTX1 841 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 ZDHHC14Q8IZN3 488 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 FATE1Q969F0 183 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
USP48-209ENST00000487880 TEPSINQ96N21 525 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 MSL2Q9HCI7 577 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.26
USP48-209ENST00000487880 MRFAP1Q9Y605 127 aa7.15□□□□□ -1.26
USP48-209ENST00000487880 XPOTO43592 962 aaKnown RBP7.14□□□□□ -1.27
USP48-209ENST00000487880 TOX4O94842 621 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 INHBBP09529 407 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 LTA4HP09960 611 aaKnown RBP7.14□□□□□ -1.27
USP48-209ENST00000487880 C5AR1P21730 350 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 KIR2DL3P43628 341 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 RECQLP46063 649 aaPredicted RBP7.14□□□□□ -1.27
USP48-209ENST00000487880 RAC3P60763 192 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 ATP2C1P98194 919 aaPredicted RBP7.14□□□□□ -1.27
USP48-209ENST00000487880 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 MSL3Q8N5Y2 521 aaKnown RBP7.14□□□□□ -1.27
USP48-209ENST00000487880 HOOK2Q96ED9 719 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 UIMC1Q96RL1 719 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms