RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ING3Q9NXR8 418 aa6.35□□□□□ -1.39
SMC4-219ENST00000487747 LCHNA4D1U4 455 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 GRXCR1A8MXD5 290 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 KPNA6O60684 536 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 RFPL3O75679 317 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 NR4A1P22736 598 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 ADCY1Q08828 1119 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 CCDC144BQ3MJ40 725 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 MRGPRGQ86SM5 289 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 NOL10Q9BSC4 688 aaKnown RBP6.34□□□□□ -1.39
SMC4-219ENST00000487747 TTPALQ9BTX7 342 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 MS4A5Q9H3V2 200 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 PIF1Q9H611 641 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 CD2APQ9Y5K6 639 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
SMC4-219ENST00000487747 TGM5O43548 720 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 PCDH8O95206 1070 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 PEX11BO96011 259 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 GAAP10253 952 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 FLT3P36888 993 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 DSG1Q02413 1049 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 SPIDRQ14159 915 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 RABL3Q5HYI8 236 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 TIGD7Q6NT04 549 aaPredicted RBP6.33□□□□□ -1.4
SMC4-219ENST00000487747 HTR3DQ70Z44 454 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 CHTF18Q8WVB6 975 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 ARL8AQ96BM9 186 aa6.33□□□□□ -1.4
SMC4-219ENST00000487747 ZNF496Q96IT1 587 aaPredicted RBP6.33□□□□□ -1.4
SMC4-219ENST00000487747 C14orf93Q9H972 538 aaKnown RBP6.33□□□□□ -1.4
SMC4-219ENST00000487747 MAGEC2Q9UBF1 373 aaPredicted RBP6.33□□□□□ -1.4
SMC4-219ENST00000487747 F2P00734 622 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 HK1P19367 917 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 NPEPPSP55786 919 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 SMAD3P84022 425 aaKnown RBP6.32□□□□□ -1.4
SMC4-219ENST00000487747 COL10A1Q03692 680 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 CD69Q07108 199 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 ZBTB41Q5SVQ8 909 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 PPP1R14CQ8TAE6 165 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
SMC4-219ENST00000487747 ORAI3Q9BRQ5 295 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 OSBPL6Q9BZF3 934 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMC4-219ENST00000487747 THG1LQ9NWX6 298 aaKnown RBP6.32□□□□□ -1.4
SMC4-219ENST00000487747 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 ZKSCAN5Q9Y2L8 839 aa6.32□□□□□ -1.4
SMC4-219ENST00000487747 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 MFAP3LO75121 409 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 TGM1P22735 817 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 PCBP1Q15365 356 aaKnown RBP eCLIP6.31□□□□□ -1.47e-12■■■■■ 38.2
SMC4-219ENST00000487747 ZNF662Q6ZS27 426 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 VRK3Q8IV63 474 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
SMC4-219ENST00000487747 ST8SIA2Q92186 375 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 UIMC1Q96RL1 719 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 ENKD1Q9H0I2 346 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 INTS7Q9NVH2 962 aaKnown RBP6.31□□□□□ -1.4
SMC4-219ENST00000487747 IFT57Q9NWB7 429 aa6.31□□□□□ -1.4
SMC4-219ENST00000487747 FOXN1O15353 648 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 MTSS1O43312 755 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 RAMP2O60895 175 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 NEK4P51957 841 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 NANOS3P60323 173 aaKnown RBP6.3□□□□□ -1.4
SMC4-219ENST00000487747 PURAQ00577 322 aaKnown RBP6.3□□□□□ -1.4
SMC4-219ENST00000487747 FSTL1Q12841 308 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 MFSD5Q6N075 450 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
SMC4-219ENST00000487747 ZNF276Q8N554 614 aa6.3□□□□□ -1.4
SMC4-219ENST00000487747 FDXACB1Q9BRP7 624 aaPredicted RBP6.3□□□□□ -1.4
SMC4-219ENST00000487747 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
SMC4-219ENST00000487747 ALDH1A2O94788 518 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 FSBPO95073 299 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 ZFP36P26651 326 aaKnown RBP6.29□□□□□ -1.4
SMC4-219ENST00000487747 CASRP41180 1078 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 LAIR1Q6GTX8 287 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 RHOUQ7L0Q8 258 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 ZZZ3Q8IYH5 903 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 EFHBQ8N7U6 833 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 HIST1H2AHQ96KK5 128 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 PRRX2Q99811 253 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 HIST1H2AJQ99878 128 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 CPEB1Q9BZB8 566 aaKnown RBP6.29□□□□□ -1.4
SMC4-219ENST00000487747 MSRAQ9UJ68 235 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 USP18Q9UMW8 372 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 SORCS3Q9UPU3 1222 aa6.29□□□□□ -1.4
SMC4-219ENST00000487747 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
SMC4-219ENST00000487747 GAS7O60861 476 aa6.28□□□□□ -1.4
SMC4-219ENST00000487747 IPO13O94829 963 aaKnown RBP6.28□□□□□ -1.4
SMC4-219ENST00000487747 LY86O95711 162 aa6.28□□□□□ -1.4
SMC4-219ENST00000487747 GNAT2P19087 354 aa6.28□□□□□ -1.4
SMC4-219ENST00000487747 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
SMC4-219ENST00000487747 CD40P25942 277 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms