RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 TRAIPQ9BWF2 469 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 TTC12Q9H892 705 aaPredicted RBP26.34■■□□□ 1.81
PLOD3-215ENST00000487563 IFT122Q9HBG6 1241 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 FAM105AQ9NUU6 356 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 CLEC1BQ9P126 229 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 RAPGEFL1Q9UHV5 662 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 LIMCH1Q9UPQ0 1083 aa26.34■■□□□ 1.81
PLOD3-215ENST00000487563 FAM86C2PA6NEL3 165 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 FSCN2O14926 492 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 GLP2RO95838 553 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 SRGAP2BP0DMP2 458 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 ALADP13716 330 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 TXKP42681 527 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 GUCY1B3Q02153 619 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 LAMTOR4Q0VGL1 99 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 DUSP6Q16828 381 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 GLB1LQ6UWU2 654 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 SRGAP1Q7Z6B7 1085 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 CCDC83Q8IWF9 413 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 RSPH1Q8WYR4 309 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 LPPQ93052 612 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 MTRQ99707 1265 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 AGPAT5Q9NUQ2 364 aa26.33■■□□□ 1.81
PLOD3-215ENST00000487563 ALDH7A1P49419 539 aaKnown RBP26.32■■□□□ 1.8
PLOD3-215ENST00000487563 ST3GAL1Q11201 340 aa26.32■■□□□ 1.8
PLOD3-215ENST00000487563 TMC7Q7Z402 723 aa26.32■■□□□ 1.8
PLOD3-215ENST00000487563 NGRNQ9NPE2 291 aaKnown RBP26.32■■□□□ 1.8
PLOD3-215ENST00000487563 INPP5FQ9Y2H2 1132 aa26.32■■□□□ 1.8
PLOD3-215ENST00000487563 ARID2Q68CP9 1835 aa26.32■■□□□ 1.8
PLOD3-215ENST00000487563 ZBTB39O15060 712 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 ASAP2O43150 1006 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 ZC3H11AO75152 810 aaKnown RBP eCLIP26.31■■□□□ 1.8
PLOD3-215ENST00000487563 SLITRK3O94933 977 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 EYA4O95677 639 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 ATP2B1P20020 1258 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 COASYQ13057 564 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 SLC39A11Q8N1S5 342 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 RNF149Q8NC42 400 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 SMRP1Q8NCR6 262 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 PGBD4Q96DM1 585 aa26.31■■□□□ 1.8
PLOD3-215ENST00000487563 C19orf67A6NJJ6 358 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 GPR37L1O60883 481 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 CA8P35219 290 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 BCAR1P56945 870 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 RNASELQ05823 741 aaKnown RBP26.3■■□□□ 1.8
PLOD3-215ENST00000487563 FERMT3Q86UX7 667 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 TMEM169Q96HH4 297 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 C8orf76Q96K31 380 aa26.3■■□□□ 1.8
PLOD3-215ENST00000487563 WNT7AO00755 349 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 DCXO43602 365 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 ERLIN2O94905 339 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 MCM7P33993 719 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 RBM10P98175 930 aaKnown RBP26.29■■□□□ 1.8
PLOD3-215ENST00000487563 BMS1Q14692 1282 aaKnown RBP26.29■■□□□ 1.8
PLOD3-215ENST00000487563 NOMO2Q5JPE7 1267 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 MINDY3Q9H8M7 445 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 PCDHB2Q9Y5E7 798 aa26.29■■□□□ 1.8
PLOD3-215ENST00000487563 CARNS1A5YM72 827 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 NT5C1B-RDH14C9J2C7 533 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 ZNF623O75123 536 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 LYPLA2O95372 231 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 TFDP1Q14186 410 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 MXD4Q14582 209 aaPredicted RBP26.28■■□□□ 1.8
PLOD3-215ENST00000487563 SMC1AQ14683 1233 aaKnown RBP26.28■■□□□ 1.8
PLOD3-215ENST00000487563 VN1R2Q8NFZ6 395 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 URGCPQ8TCY9 931 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 HSD17B14Q9BPX1 270 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 LLPHQ9BRT6 129 aaKnown RBP26.28■■□□□ 1.8
PLOD3-215ENST00000487563 GBP3Q9H0R5 595 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 C11orf16Q9NQ32 467 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 ANKEF1Q9NU02 776 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 TBC1D13Q9NVG8 400 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 HCN4Q9Y3Q4 1203 aa26.28■■□□□ 1.8
PLOD3-215ENST00000487563 USP15Q9Y4E8 981 aaPredicted RBP26.28■■□□□ 1.8
PLOD3-215ENST00000487563 POTEMA6NI47 508 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 MEIS3P2A8K0S8 358 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 HIDE1A8MVS5 230 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 GNL2Q13823 731 aaKnown RBP26.27■■□□□ 1.8
PLOD3-215ENST00000487563 LLGL2Q6P1M3 1020 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 MTMR9Q96QG7 549 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 XPNPEP1Q9NQW7 623 aa26.27■■□□□ 1.8
PLOD3-215ENST00000487563 DGAT1O75907 488 aa26.26■■□□□ 1.79
PLOD3-215ENST00000487563 FAM184AQ8NB25 1140 aa26.26■■□□□ 1.79
PLOD3-215ENST00000487563 ZSCAN31Q96LW9 406 aaPredicted RBP26.26■■□□□ 1.79
PLOD3-215ENST00000487563 TMEM60Q9H2L4 133 aa26.26■■□□□ 1.79
PLOD3-215ENST00000487563 INO80B-WBP1J3KQ70 363 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 OFD1O75665 1012 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 TECP42680 631 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 HMGN5P82970 282 aaKnown RBP26.25■■□□□ 1.79
PLOD3-215ENST00000487563 NCBP1Q09161 790 aaKnown RBP26.25■■□□□ 1.79
PLOD3-215ENST00000487563 TMEM87AQ8NBN3 555 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 PIGOQ8TEQ8 1089 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 NRDE2Q9H7Z3 1164 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 RSAD1Q9HA92 442 aa26.25■■□□□ 1.79
PLOD3-215ENST00000487563 CNTNAP2Q9UHC6 1331 aa26.24■■□□□ 1.79
PLOD3-215ENST00000487563 RARRES1P49788 294 aa26.24■■□□□ 1.79
PLOD3-215ENST00000487563 PTENP60484 403 aa26.24■■□□□ 1.79
PLOD3-215ENST00000487563 PCBP1Q15365 356 aaKnown RBP eCLIP26.24■■□□□ 1.79
PLOD3-215ENST00000487563 SH2B1Q9NRF2 756 aaPredicted RBP26.24■■□□□ 1.79
PLOD3-215ENST00000487563 PRR33A8MZF0 331 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms