RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 LEXMQ3ZCV2 418 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 LRRC43Q8N309 656 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 ASAP3Q8TDY4 903 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 PABPC5Q96DU9 382 aaKnown RBP12.74□□□□□ -0.37
SPEN-205ENST00000487496 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
SPEN-205ENST00000487496 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
SPEN-205ENST00000487496 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
SPEN-205ENST00000487496 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 NCK2O43639 380 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
SPEN-205ENST00000487496 GLRA2P23416 452 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 RAB27AP51159 221 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 TFDP1Q14186 410 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 PCBP1Q15365 356 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■□□□□ 8.3
SPEN-205ENST00000487496 CTC1Q2NKJ3 1217 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
SPEN-205ENST00000487496 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.73□□□□□ -0.37
SPEN-205ENST00000487496 LPPQ93052 612 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
SPEN-205ENST00000487496 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
SPEN-205ENST00000487496 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 REV3LO60673 3130 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 KIAA1671Q9BY89 1806 aa12.73□□□□□ -0.37
SPEN-205ENST00000487496 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 H3BQV1 296 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 INO80B-WBP1J3KQ70 363 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 LAD1O00515 517 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 ERLIN2O94905 339 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 MUTP22033 750 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPEN-205ENST00000487496 LTBRP36941 435 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 PBX3P40426 434 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 ERVFC1P60507 584 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 CAPSQ13938 189 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 PDIA5Q14554 519 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 IL17AQ16552 155 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 ECM1Q16610 540 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 RILPL1Q5EBL4 403 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 UBXN11Q5T124 520 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 KCNT2Q6UVM3 1135 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 GLB1LQ6UWU2 654 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 MICAL1Q8TDZ2 1067 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 PGBD4Q96DM1 585 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 ZNF558Q96NG5 402 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 MRPL9Q9BYD2 267 aaKnown RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 NFKBIZQ9BYH8 718 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 IGFLR1Q9H665 355 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 GPRC5CQ9NQ84 441 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 PCDHGC5Q9Y5F6 944 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
SPEN-205ENST00000487496 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
SPEN-205ENST00000487496 XIRP2A4UGR9 3374 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 TSPAN1O60635 241 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 OFD1O75665 1012 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 PPM1AP35813 382 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.37
SPEN-205ENST00000487496 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
SPEN-205ENST00000487496 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 ADGRD2Q7Z7M1 963 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 MCPH1Q8NEM0 835 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 RSPH1Q8WYR4 309 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.37
SPEN-205ENST00000487496 RAB34Q9BZG1 259 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 TLR9Q9NR96 1032 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 PUF60Q9UHX1 559 aaKnown RBP12.71□□□□□ -0.37
SPEN-205ENST00000487496 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 LZTS1Q9Y250 596 aa12.71□□□□□ -0.37
SPEN-205ENST00000487496 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 LINC01565O15544 149 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 CYP11B2P19099 503 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 AXLP30530 894 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 PRPHP41219 470 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 BCAR1P56945 870 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 KRT17Q04695 432 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 ADAM15Q13444 863 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 AMHR2Q16671 573 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms