RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 ALADP13716 330 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 PFKFB1P16118 471 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 CYP11B2P19099 503 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 SLC12A3P55017 1021 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 RBL2Q08999 1139 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 DRP2Q13474 957 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 MCM6Q14566 821 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 NAALADL2Q58DX5 795 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 IER5Q5VY09 327 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 CLEC17AQ6ZS10 378 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 IQUBQ8NA54 791 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 MCPH1Q8NEM0 835 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
TOP3B-216ENST00000487485 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 DHX58Q96C10 678 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 MAP7D2Q96T17 732 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 KCNH3Q9ULD8 1083 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 CACNA1HO95180 2353 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 FAM237AA0A1B0GTK4 181 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 H3BQ06 376 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 M0QZ92 97 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 CHRNA1P02708 482 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 CTSHP09668 335 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 NHLH1Q02575 133 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 MGAT3Q09327 533 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 E2F4Q16254 413 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 FAM26DQ5JW98 314 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 FAM102BQ5T8I3 360 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 SV2BQ7L1I2 683 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 RHPN2Q8IUC4 686 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 PRPF31Q8WWY3 499 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 PSPC1Q8WXF1 523 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 RUSC1Q9BVN2 902 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 CELF4Q9BZC1 486 aaKnown RBP11.84□□□□□ -0.51
TOP3B-216ENST00000487485 POLD4Q9HCU8 107 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 TECTAO75443 2155 aa11.84□□□□□ -0.51
TOP3B-216ENST00000487485 MICAL3Q7RTP6 2002 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 ASAP2O43150 1006 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GPR32O75388 356 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 ARL2P36404 184 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 NDUFA8P51970 172 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 IKBKEQ14164 716 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 KIZQ2M2Z5 673 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 ARSHQ5FYA8 562 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 KSR1Q8IVT5 923 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 POLR3FQ9H1D9 316 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-216ENST00000487485 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GPRC5CQ9NQ84 441 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 KCND2Q9NZV8 630 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
TOP3B-216ENST00000487485 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 DCXO43602 365 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 HIP1RO75146 1068 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 KRT18P05783 430 aaKnown RBP11.82□□□□□ -0.52
TOP3B-216ENST00000487485 SRGAP2CP0DJJ0 459 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 GUCY2CP25092 1073 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 SYKP43405 635 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 GPC3P51654 580 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 CRYBB1P53674 252 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-216ENST00000487485 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 LAMTOR4Q0VGL1 99 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 MXD4Q14582 209 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-216ENST00000487485 LONRF3Q496Y0 759 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 CEP57L1Q8IYX8 460 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 STAMQ92783 540 aa11.82□□□□□ -0.52
TOP3B-216ENST00000487485 MRPL38Q96DV4 380 aaKnown RBP11.82□□□□□ -0.52
TOP3B-216ENST00000487485 OSMRQ99650 979 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms