RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 CNGA1P29973 690 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 LBX2Q6XYB7 198 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 THNSL2Q86YJ6 484 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 JAMLQ86YT9 394 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 ANKRD13AQ8IZ07 590 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 GPC2Q8N158 579 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 CHAC2Q8WUX2 184 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 CHAMP1Q96JM3 812 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 G6PC3Q9BUM1 346 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 MXD3Q9BW11 206 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 PRDM7Q9NQW5 492 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 TNFRSF10DQ9UBN6 386 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 EXOC6BQ9Y2D4 811 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 MED23Q9ULK4 1368 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
RTFDC1-209ENST00000487211 TCRBV16S1A1N1A0A5B0 115 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 SHTN1A0MZ66 631 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 NPHS1O60500 1241 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 IL1R1P14778 569 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 ADORA1P30542 326 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 IGFALSP35858 605 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 EPS15P42566 896 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 ZNF460Q14592 562 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 PUM3Q15397 648 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 ATP2B3Q16720 1220 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 TTLL5Q6EMB2 1281 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 KRT26Q7Z3Y9 468 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 TDRD7Q8NHU6 1098 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 LINC01599Q8WXQ3 324 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 LPIN2Q92539 896 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 ALG1Q9BT22 464 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 CAAP1Q9H8G2 361 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 PCDH12Q9NPG4 1184 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 EBF1Q9UH73 591 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 TMEM59LQ9UK28 342 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 TIMM13Q9Y5L4 95 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 LAMA2P24043 3122 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-209ENST00000487211 BAHCC1Q9P281 2608 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 A0A1B0GUL7 405 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 GSG1L2A8MUP6 293 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 FADS2P1A8MWK0 482 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 KIAA1324LA8MWY0 1029 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 IGHDP01880 384 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 IFIT1P09914 478 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 SOX5P35711 763 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 FLT3P36888 993 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 STAT3P40763 770 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 KIR2DL1P43626 348 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 KIR2DL2P43627 348 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 GMPSP49915 693 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 NEK4P51957 841 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 HK2P52789 917 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 RPL11P62913 178 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 IGBP1P78318 339 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 TNIP1Q15025 636 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 KIZQ2M2Z5 673 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 DACT2Q5SW24 774 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 UBR7Q8N806 425 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 DDX1Q92499 740 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 EAF2Q96CJ1 260 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 NEUROD6Q96NK8 337 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 BRINP2Q9C0B6 783 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 DCTPP1Q9H773 170 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
RTFDC1-209ENST00000487211 SPEF2Q9C093 1822 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 HMMRO75330 724 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 JMJD7P0C870 316 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 SRGAP2CP0DJJ0 459 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 SLC5A1P13866 664 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 VEGFAP15692 232 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 BCL6P41182 706 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 PHKA1P46020 1223 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 ANAPC15P60006 121 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 AMPD3Q01432 767 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 OS9Q13438 667 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 SLC14A2Q15849 920 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 CAVIN4Q5BKX8 364 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 STRIP1Q5VSL9 837 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 CEP128Q6ZU80 1094 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 UBE2R2Q712K3 238 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 ZNF804AQ7Z570 1209 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 SLCO6A1Q86UG4 719 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 ZC3H7AQ8IWR0 971 aaKnown RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 PPM1KQ8N3J5 372 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 CERS5Q8N5B7 392 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 PI4K2BQ8TCG2 481 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 JMJD8Q96S16 334 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 CCDC8Q9H0W5 538 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 TAF1DQ9H5J8 278 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
RTFDC1-209ENST00000487211 GPR108Q9NPR9 543 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms