RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 LAMTOR4Q0VGL1 99 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 OTUD6AQ7L8S5 288 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 TMC7Q7Z402 723 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 DIS3L2Q8IYB7 885 aaKnown RBP27.44■■□□□ 1.98
LIME1-206ENST00000487026 SLC39A11Q8N1S5 342 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 TRAIPQ9BWF2 469 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 ZSWIM4Q9H7M6 989 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 MINDY3Q9H8M7 445 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 FAM105AQ9NUU6 356 aa27.44■■□□□ 1.98
LIME1-206ENST00000487026 USP15Q9Y4E8 981 aaPredicted RBP27.44■■□□□ 1.98
LIME1-206ENST00000487026 RFC5P40937 340 aa27.43■■□□□ 1.98
LIME1-206ENST00000487026 BCAR1P56945 870 aa27.43■■□□□ 1.98
LIME1-206ENST00000487026 ST3GAL1Q11201 340 aa27.43■■□□□ 1.98
LIME1-206ENST00000487026 LLGL2Q6P1M3 1020 aa27.43■■□□□ 1.98
LIME1-206ENST00000487026 PSPC1Q8WXF1 523 aaKnown RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 POP1Q99575 1024 aaKnown RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 CDCA3Q99618 268 aaPredicted RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 EIF2AK1Q9BQI3 630 aaKnown RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 MRPL9Q9BYD2 267 aaKnown RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 NGRNQ9NPE2 291 aaKnown RBP27.43■■□□□ 1.98
LIME1-206ENST00000487026 EMC2Q15006 297 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 CALCRLQ16602 461 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 EXOC8Q8IYI6 725 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 PCDHA12Q9UN75 941 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 INPP5FQ9Y2H2 1132 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 PPME1Q9Y570 386 aa27.42■■□□□ 1.98
LIME1-206ENST00000487026 SKIP12755 728 aa27.41■■□□□ 1.98
LIME1-206ENST00000487026 ALDH7A1P49419 539 aaKnown RBP27.41■■□□□ 1.98
LIME1-206ENST00000487026 TRIM29Q14134 588 aa27.41■■□□□ 1.98
LIME1-206ENST00000487026 RNF135Q8IUD6 432 aa27.41■■□□□ 1.98
LIME1-206ENST00000487026 AGPAT5Q9NUQ2 364 aa27.41■■□□□ 1.98
LIME1-206ENST00000487026 MUTYHQ9UIF7 546 aa27.41■■□□□ 1.98
LIME1-206ENST00000487026 A0A087WWV3 80 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 ZC3H11AO75152 810 aaKnown RBP eCLIP27.4■■□□□ 1.98
LIME1-206ENST00000487026 TXKP42681 527 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 GUCY1B3Q02153 619 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 KCNC3Q14003 757 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 GLB1LQ6UWU2 654 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 SRGAP1Q7Z6B7 1085 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 FERMT3Q86UX7 667 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 HSD17B14Q9BPX1 270 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 APOL5Q9BWW9 433 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 TTC12Q9H892 705 aaPredicted RBP27.4■■□□□ 1.98
LIME1-206ENST00000487026 TBC1D13Q9NVG8 400 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 HCN4Q9Y3Q4 1203 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 PCDHB2Q9Y5E7 798 aa27.4■■□□□ 1.98
LIME1-206ENST00000487026 PRR33A8MZF0 331 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 ZNF623O75123 536 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 OFD1O75665 1012 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 ATP2B1P20020 1258 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 HOXA11P31270 313 aaPredicted RBP27.39■■□□□ 1.98
LIME1-206ENST00000487026 CA8P35219 290 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 TECP42680 631 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 RAB27AP51159 221 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 NOMO2Q5JPE7 1267 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 TMEM173Q86WV6 379 aaPredicted RBP27.39■■□□□ 1.98
LIME1-206ENST00000487026 RNF149Q8NC42 400 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 TCP11Q8WWU5 503 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 MTRQ99707 1265 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 GBP3Q9H0R5 595 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 NRDE2Q9H7Z3 1164 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 XPNPEP1Q9NQW7 623 aa27.39■■□□□ 1.98
LIME1-206ENST00000487026 NEMFO60524 1076 aa27.38■■□□□ 1.97
LIME1-206ENST00000487026 MRPL43Q8N983 215 aaKnown RBP27.38■■□□□ 1.97
LIME1-206ENST00000487026 FSD2A1L4K1 749 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 C2orf71A6NGG8 1288 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 ASAP2O43150 1006 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 EIF5BO60841 1220 aaKnown RBP27.37■■□□□ 1.97
LIME1-206ENST00000487026 RNASELQ05823 741 aaKnown RBP27.37■■□□□ 1.97
LIME1-206ENST00000487026 SMC1AQ14683 1233 aaKnown RBP27.37■■□□□ 1.97
LIME1-206ENST00000487026 UBXN11Q5T124 520 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 ANKRD54Q6NXT1 300 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 TMEM184AQ6ZMB5 413 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 AGMOQ6ZNB7 445 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 CCDC83Q8IWF9 413 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 AUTS2Q8WXX7 1259 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 PGBD4Q96DM1 585 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 FAM122AQ96E09 287 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 TMEM169Q96HH4 297 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 RPGRIP1Q96KN7 1286 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 MTMR9Q96QG7 549 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 S1PR5Q9H228 398 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 TMEM60Q9H2L4 133 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 DNAJB4Q9UDY4 337 aa27.37■■□□□ 1.97
LIME1-206ENST00000487026 LOC730098B7Z3J9 87 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 GAS2O43903 313 aaKnown RBP27.36■■□□□ 1.97
LIME1-206ENST00000487026 CXCL14O95715 111 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 PLA2G5P39877 138 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 AFF1P51825 1210 aaKnown RBP27.36■■□□□ 1.97
LIME1-206ENST00000487026 SYCE2Q6PIF2 218 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 ZNF280BQ86YH2 543 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 VPS52Q8N1B4 723 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 BCL7CQ8WUZ0 217 aaPredicted RBP27.36■■□□□ 1.97
LIME1-206ENST00000487026 LIMCH1Q9UPQ0 1083 aa27.36■■□□□ 1.97
LIME1-206ENST00000487026 B4GALT3O60512 393 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 LYPLA2O95372 231 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 GALTP07902 379 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 SRGAP2BP0DMP2 458 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 HERC4Q5GLZ8 1057 aaPredicted RBP27.35■■□□□ 1.97
LIME1-206ENST00000487026 MRPL10Q7Z7H8 261 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms