RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 LMBRD1Q9NUN5 540 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 LAMA2P24043 3122 aaKnown RBP17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 TTC3P53804 2025 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 GPR182O15218 404 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 SLC16A4O15374 487 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 TBCAO75347 108 aaKnown RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 AMPD3Q01432 767 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 FAM160A1Q05DH4 1040 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 DMP1Q13316 513 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 PSRC1Q6PGN9 363 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 CNNM3Q8NE01 707 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 C7orf25Q9BPX7 421 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 INO80BQ9C086 356 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 CXXC1Q9P0U4 656 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
RPUSD3-217ENST00000485705 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 MGEA5O60502 916 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 EDN1P05305 212 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 IDEP14735 1019 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 BMP8BP34820 402 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 ASIC1P78348 528 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 AMHR2Q16671 573 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 ODR4Q5SWX8 454 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 SPIRE2Q8WWL2 714 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 FIZ1Q96SL8 496 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
RPUSD3-217ENST00000485705 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 B4GALT5O43286 388 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 SFPQP23246 707 aaKnown RBP eCLIP17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 IKBKEQ14164 716 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 TAS1R3Q7RTX0 852 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 APBB2Q92870 758 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 NTPCRQ9BSD7 190 aaKnown RBP17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 LRRC27Q9C0I9 530 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 ARHGAP28Q9P2N2 729 aa17.08■□□□□ 0.32
RPUSD3-217ENST00000485705 ABHD14A-ACY1A0A1B0GW23 586 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 ZBBXA8MT70 800 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 ENPP3O14638 875 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 TRAK2O60296 914 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 TSPAN1O60635 241 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 ACTN1P12814 892 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 NCKAP1LP55160 1127 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 DEFB103AP81534 67 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 COASYQ13057 564 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 DSC3Q14574 896 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 ADAM2Q99965 735 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 FGFBP2Q9BYJ0 223 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 FZD8Q9H461 694 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 COLQQ9Y215 455 aaPredicted RBP17.07■□□□□ 0.32
RPUSD3-217ENST00000485705 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 K7ENM7 598 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 KLRC4O43908 158 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 ERLIN2O94905 339 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 PRKCBP05771 671 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 GAP43P17677 238 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 SMTNP53814 917 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 MAPK6Q16659 721 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 HERC4Q5GLZ8 1057 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 TMCO2Q7Z6W1 182 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 CCDC65Q8IXS2 484 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
RPUSD3-217ENST00000485705 FTHL17Q9BXU8 183 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms