RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 A0A087WWV3 80 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 A0A087WZ62 844 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 INO80B-WBP1J3KQ70 363 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 K7ERI5 159 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 NBNO60934 754 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 STAG3L1P0CL83 205 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 GHRP10912 638 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 PLS3P13797 630 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 IGFBP4P22692 258 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 MCM6Q14566 821 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 HSP90AA2PQ14568 343 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-208ENST00000485618 LPIN1Q14693 890 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 RASIP1Q5U651 963 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 USP49Q70CQ1 688 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 CATSPER4Q7RTX7 472 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 HACE1Q8IYU2 909 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 MYCT1Q8N699 235 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 FSIP1Q8NA03 581 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 RSPH1Q8WYR4 309 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 WNT8BQ93098 351 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 CCDC51Q96ER9 411 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 PRIMPOLQ96LW4 560 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 OSMRQ99650 979 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 FDXACB1Q9BRP7 624 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-208ENST00000485618 GTPBP4Q9BZE4 634 aaKnown RBP9.13□□□□□ -0.95
SF3A1-208ENST00000485618 NKX2-4Q9H2Z4 354 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 ADAMTS10Q9H324 1103 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 KMT5AQ9NQR1 393 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-208ENST00000485618 SEL1LQ9UBV2 794 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 MSRAQ9UJ68 235 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 PADI3Q9ULW8 664 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 EVPLQ92817 2033 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 UMODL1Q5DID0 1318 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 A0A1B0GVL5 298 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 HIP1RO75146 1068 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 PFKFB1P16118 471 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 PTENP60484 403 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 UBE2HP62256 183 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 ALCAMQ13740 583 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 OTOP2Q7RTS6 562 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 KCNK18Q7Z418 384 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 DBF4BQ8NFT6 615 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 ATXN2LQ8WWM7 1075 aaKnown RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 ZBTB10Q96DT7 871 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 FAM122AQ96E09 287 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 SLC9A7Q96T83 725 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 NTPCRQ9BSD7 190 aaKnown RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 RUSC1Q9BVN2 902 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 XPNPEP1Q9NQW7 623 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 BLOC1S4Q9NUP1 217 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 CXXC1Q9P0U4 656 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-208ENST00000485618 ST3GAL5Q9UNP4 418 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
SF3A1-208ENST00000485618 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 FAM237AA0A1B0GTK4 181 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PVALEFA0A1B0GWK0 134 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 HOXA2O43364 376 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 KINO60870 393 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 KIF20AO95235 890 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 SMC2O95347 1197 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 MAPTP10636 758 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 IDEP14735 1019 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PTMSP20962 102 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 GLRA2P23416 452 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 CD52P31358 61 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 NPTX2P47972 431 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 RAB27AP51159 221 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PEX3P56589 373 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ASIC1P78348 528 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 DRP2Q13474 957 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PRPF4BQ13523 1007 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 CAPSQ13938 189 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 HERC4Q5GLZ8 1057 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 TWF2Q6IBS0 349 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 NOTUMQ6P988 496 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 TRAF7Q6Q0C0 670 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 CLEC17AQ6ZS10 378 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 SLC24A5Q71RS6 500 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 KSR1Q8IVT5 923 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 FAM178BQ8IXR5 827 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 MICALL1Q8N3F8 863 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms