RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	ACO2	Q99798	780 aa	Known RBP	5.21	□□□□□ -1.58
FN1-222	ENST00000485567	GORASP1	Q9BQQ3	440 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	SOX7	Q9BT81	388 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	ADI1	Q9BV57	179 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	CHST12	Q9NRB3	414 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
FN1-222	ENST00000485567	SAE1	Q9UBE0	346 aa	Predicted RBP	5.21	□□□□□ -1.58
FN1-222	ENST00000485567	USP25	Q9UHP3	1055 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	LIMCH1	Q9UPQ0	1083 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567	COMMD10	Q9Y6G5	202 aa		5.21	□□□□□ -1.58
FN1-222	ENST00000485567		A0A0G2JNJ9	132 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	SCO2	A0A1W2PP80	73 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	N4BP3	O15049	544 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	SEMA7A	O75326	666 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	EIF3J	O75822	258 aa	Known RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	ZBED1	O96006	694 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	KNG1	P01042	644 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	GSPT1	P15170	499 aa	Known RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	USP14	P54578	494 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	ANTXR2	P58335	489 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	FOXO4	P98177	505 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MEF2A	Q02078	507 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	PPP3CA	Q08209	521 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MGAT2	Q10469	447 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	SAFB	Q15424	915 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	PGS1	Q32NB8	556 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	WDR72	Q3MJ13	1102 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	COBLL1	Q53SF7	1204 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MPZL3	Q6UWV2	235 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	LMBR1L	Q6UX01	489 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	DENND1C	Q8IV53	801 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	IGDCC3	Q8IVU1	814 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	BCL6B	Q8N143	479 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	ZBTB34	Q8NCN2	500 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	GPR156	Q8NFN8	814 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MORC4	Q8TE76	937 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	LIN37	Q96GY3	246 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	DYDC2	Q96IM9	177 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567	POLR3GL	Q9BT43	218 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MCOLN1	Q9GZU1	580 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	TMEM60	Q9H2L4	133 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	EPB41L4B	Q9H329	900 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	MYH16	Q9H6N6	1097 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	FAM204A	Q9H8W3	233 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	RBM12	Q9NTZ6	932 aa	Known RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567		Q9UFV3	132 aa		5.2	□□□□□ -1.58
FN1-222	ENST00000485567	CFAP20	Q9Y6A4	193 aa	Known RBP	5.2	□□□□□ -1.58
FN1-222	ENST00000485567		A0A1W2PR48	441 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	FAM171A2	A8MVW0	826 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567		H0Y858	1186 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	FSBP	O95073	299 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	RPLP2	P05387	115 aa	Known RBP	5.19	□□□□□ -1.58
FN1-222	ENST00000485567	RHCE	P18577	417 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	IL12RB1	P42701	662 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	NCKAP1L	P55160	1127 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	CCT2	P78371	535 aa	Known RBP	5.19	□□□□□ -1.58
FN1-222	ENST00000485567	RHD	Q02161	417 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	PICALM	Q13492	652 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	RTP5	Q14D33	572 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	BRD3	Q15059	726 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	VPS72	Q15906	364 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	C19orf54	Q5BKX5	351 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	OVCH2	Q7RTZ1	564 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	SMC5	Q8IY18	1101 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	MARCH10	Q8NA82	808 aa	Predicted RBP	5.19	□□□□□ -1.58
FN1-222	ENST00000485567	SYT3	Q9BQG1	590 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.19	□□□□□ -1.58
FN1-222	ENST00000485567	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.19	□□□□□ -1.58
FN1-222	ENST00000485567	INTU	Q9ULD6	942 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	CARMIL2	Q6F5E8	1435 aa		5.19	□□□□□ -1.58
FN1-222	ENST00000485567	LOC102724159	A0A0B4J2E5	919 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	UBXN7	O94888	489 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	COL6A1	P12109	1028 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	FXR1	P51114	621 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	SESN2	P58004	480 aa	Predicted RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	MGAT5	Q09328	741 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	EIF4H	Q15056	248 aa	Known RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	PWP2	Q15269	919 aa	Known RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	C3orf36	Q3SXR2	165 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	GORAB	Q5T7V8	394 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	TMEM132E	Q6IEE7	984 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	PPP4R3A	Q6IN85	833 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	CERS3	Q8IU89	383 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	KIAA0319L	Q8IZA0	1049 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	UNC5B	Q8IZJ1	945 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	RIN2	Q8WYP3	895 aa	Predicted RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	NKD2	Q969F2	451 aa	Predicted RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	NOX5	Q96PH1	765 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	NSUN3	Q9H649	340 aa	Known RBP	5.18	□□□□□ -1.58
FN1-222	ENST00000485567	VWA7	Q9Y334	891 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567	RPTOR	Q8N122	1335 aa		5.18	□□□□□ -1.58
FN1-222	ENST00000485567		A6NNZ2	444 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	FAM227A	F5H4B4	570 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	APAF1	O14727	1248 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	TPP1	O14773	563 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	SLC16A6	O15403	523 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	SGTA	O43765	313 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms