RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TMEM173Q86WV6 379 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 TBCKQ8TEA7 893 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 SNX27Q96L92 541 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 FDXACB1Q9BRP7 624 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 FAM105AQ9NUU6 356 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 TBC1D13Q9NVG8 400 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 PPME1Q9Y570 386 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 SNX14Q9Y5W7 946 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 PLXNA3P51805 1871 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 CHMP2AO43633 222 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 LILRB3O75022 631 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 ZC3H11AO75152 810 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 SP100P23497 879 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 PSMA5P28066 241 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 NBL1P41271 181 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 NLRP5P59047 1200 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 MTERF2Q49AM1 385 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 GALNT17Q6IS24 598 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 ANO5Q75V66 913 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 MRPL10Q7Z7H8 261 aaKnown RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 EXOC8Q8IYI6 725 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 TDRD5Q8NAT2 981 aaKnown RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 DAGLBQ8NCG7 672 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 ETNPPLQ8TBG4 499 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 PGBD4Q96DM1 585 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 SLC26A6Q9BXS9 759 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 IFT122Q9HBG6 1241 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 CYP26B1Q9NR63 512 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 SUCLA2Q9P2R7 463 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 SEPT9Q9UHD8 586 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-227ENST00000485102 PCDHA4Q9UN74 947 aa14.62□□□□□ -0.07
HDAC6-227ENST00000485102 GVINP1Q7Z2Y8 2422 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 H0Y858 1186 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 EPCAMP16422 314 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 PSMC5P62195 406 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 PTPN14Q15678 1187 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 RARS2Q5T160 578 aaKnown RBP14.61□□□□□ -0.07
HDAC6-227ENST00000485102 ASTLQ6HA08 431 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-227ENST00000485102 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 GPR149Q86SP6 731 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 RHPN2Q8IUC4 686 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 C12orf76Q8N812 135 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-227ENST00000485102 TMEM105Q8N8V8 129 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 GJA10Q969M2 543 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 RHOBTB2Q9BYZ6 727 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 AGPAT5Q9NUQ2 364 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 FAM86C1Q9NVL1 165 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 KANSL3Q9P2N6 904 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 LIMD1Q9UGP4 676 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 DBR1Q9UK59 544 aaKnown RBP14.61□□□□□ -0.07
HDAC6-227ENST00000485102 PIN4Q9Y237 131 aaKnown RBP14.61□□□□□ -0.07
HDAC6-227ENST00000485102 DENND4AQ7Z401 1863 aa14.61□□□□□ -0.07
HDAC6-227ENST00000485102 MEIS3P2A8K0S8 358 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 EPB41L2O43491 1005 aaKnown RBP14.6□□□□□ -0.07
HDAC6-227ENST00000485102 DKC1O60832 514 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC6-227ENST00000485102 ALDH2P05091 517 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 NPY5RQ15761 445 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 AGMOQ6ZNB7 445 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 CATSPER4Q7RTX7 472 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 CABP7Q86V35 215 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 TRIM22Q8IYM9 498 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 BCL7CQ8WUZ0 217 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-227ENST00000485102 AUTS2Q8WXX7 1259 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 LPPQ93052 612 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 ACSF2Q96CM8 615 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-227ENST00000485102 FAM20AQ96MK3 541 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 VN1R3Q9BXE9 311 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 SFXN1Q9H9B4 322 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 CNTNAP2Q9UHC6 1331 aa14.6□□□□□ -0.07
HDAC6-227ENST00000485102 TMEM150BA6NC51 233 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 DEXIO95424 95 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 PAPLNO95428 1278 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 TDP2O95551 362 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 C1RP00736 705 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 ASGR2P07307 311 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 WEE2P0C1S8 567 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 QARSP47897 775 aaKnown RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 SLC11A1P49279 550 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 CLCN4P51793 760 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 FOXK2Q01167 660 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 PPP2R5CQ13362 524 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 CYP26C1Q6V0L0 522 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 OTOP3Q7RTS5 596 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 SRGAP1Q7Z6B7 1085 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 ZNF280BQ86YH2 543 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 CMASQ8NFW8 434 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 ZNF274Q96GC6 653 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 KLHL5Q96PQ7 755 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 EMILIN2Q9BXX0 1053 aa14.59□□□□□ -0.07
HDAC6-227ENST00000485102 DHX33Q9H6R0 707 aaKnown RBP14.59□□□□□ -0.07
HDAC6-227ENST00000485102 DNAJB4Q9UDY4 337 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms