RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 COL9A2Q14055 689 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 MRM1Q6IN84 353 aaKnown RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 IQCF2Q8IXL9 164 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 NAXEQ8NCW5 288 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ITFG2Q969R8 447 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 PAIP2Q9BPZ3 127 aaKnown RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 NAPBQ9H115 298 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 RALGAPA2Q2PPJ7 1873 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 E2F8A0AVK6 867 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 FLOT1O75955 427 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 CTNNA1P35221 906 aaKnown RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 STAT2P52630 851 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 TRIM32Q13049 653 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 TBX2Q13207 712 aaPredicted RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 PRKG2Q13237 762 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 CCL14Q16627 93 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ASPRV1Q53RT3 343 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 BTN2A1Q7KYR7 527 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 COL26A1Q96A83 441 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 FSD1Q9BTV5 496 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 ACAD9Q9H845 621 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 MKNK2Q9HBH9 465 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 NCOA5Q9HCD5 579 aaKnown RBP5.91□□□□□ -1.46
CCDC39-205ENST00000485055 FAM184BQ9ULE4 1060 aa5.91□□□□□ -1.46
CCDC39-205ENST00000485055 MCM3APO60318 1980 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 PAX7P23759 505 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 SEPHS1P49903 392 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 ALDH5A1P51649 535 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-205ENST00000485055 ZNF543Q08ER8 600 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 SEC23AQ15436 765 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 TTC22Q5TAA0 569 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 FOXB2Q5VYV0 432 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 SLFN13Q68D06 897 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 TYW1BQ6NUM6 668 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 NXPE4Q6UWF7 544 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 NUDT18Q6ZVK8 323 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 SYDE1Q6ZW31 735 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-205ENST00000485055 PCSK9Q8NBP7 692 aaKnown RBP5.9□□□□□ -1.46
CCDC39-205ENST00000485055 OTUD7AQ8TE49 926 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-205ENST00000485055 JAKMIP2Q96AA8 810 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 PLD4Q96BZ4 506 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 THAP11Q96EK4 314 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 KRT23Q9C075 422 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 PDRG1Q9NUG6 133 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 PNMA8BQ9ULN7 279 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-205ENST00000485055 TLR6Q9Y2C9 796 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 ABCB11O95342 1321 aa5.9□□□□□ -1.46
CCDC39-205ENST00000485055 CYP2D7A0A087X1C5 515 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 GPR39O43194 453 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 AHCYL1O43865 530 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 COQ9O75208 318 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 DDAH1O94760 285 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 ASGR2P07307 311 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC175P0C221 793 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 CYP2B6P20813 491 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 TFAP4Q01664 338 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 CACNB1Q02641 598 aaPredicted RBP5.9□□□□□ -1.47
CCDC39-205ENST00000485055 KCNC4Q03721 635 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 MINDY4Q4G0A6 757 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 FBXW10Q5XX13 1052 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 CLEC4DQ8WXI8 215 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 NUDT16L1Q9BRJ7 211 aaKnown RBP5.9□□□□□ -1.47
CCDC39-205ENST00000485055 KATNAL1Q9BW62 490 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 PDLIM7Q9NR12 457 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 SEL1LQ9UBV2 794 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 GTF3C4Q9UKN8 822 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 COLQQ9Y215 455 aaPredicted RBP5.9□□□□□ -1.47
CCDC39-205ENST00000485055 PTPRSQ13332 1948 aa5.9□□□□□ -1.47
CCDC39-205ENST00000485055 A0A0D9SFI3 127 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 FAM170AA1A519 330 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 LRRC10BA6NIK2 292 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 A6NNZ2 444 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 TMEM110-MUSTN1A8MSY1 372 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 C9IYK1 514 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 POTEB2H3BUK9 544 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 AKR1B10O60218 316 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 KIF5CO60282 957 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 STAM2O75886 525 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 HSD17B4P51659 736 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 USP46P62068 366 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 NMIQ13287 307 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 GBX1Q14549 363 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 LRRC26Q2I0M4 334 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CXorf57Q6NSI4 855 aaKnown RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 TMCO3Q6UWJ1 677 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 DAAM2Q86T65 1068 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 STAG2Q8N3U4 1231 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 PPM1MQ96MI6 270 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 DHRS4Q9BTZ2 278 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 APOL5Q9BWW9 433 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 SMOC1Q9H4F8 434 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CGNQ9P2M7 1197 aaKnown RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CLIP2Q9UDT6 1046 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 GBF1Q92538 1859 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 B4DLN1 442 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 BHMG1C9JSJ3 638 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-205ENST00000485055 H3BRJ5 948 aa5.89□□□□□ -1.47
CCDC39-205ENST00000485055 CPLX1O14810 134 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms