RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MAPK13O15264 365 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 KIF5CO60282 957 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 UCHL3P15374 230 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 CNGA1P29973 690 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 ARL2P36404 184 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 ZNF157P51786 506 aaPredicted RBP18.23■□□□□ 0.51
CTSA-207ENST00000484855 TMEM63BQ5T3F8 832 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 PLPPR4Q7Z2D5 763 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 DPP9Q86TI2 863 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 PPME1Q9Y570 386 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 HNRNPDLO14979 420 aaKnown RBP18.23■□□□□ 0.51
CTSA-207ENST00000484855 GLRA2P23416 452 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 ADSSP30520 456 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 MAPK4P31152 587 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 CASQ1P31415 396 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 GTF2F1P35269 517 aaKnown RBP eCLIP18.23■□□□□ 0.516e-6■■■■□ 21.5
CTSA-207ENST00000484855 NAMPTP43490 491 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 MYL7Q01449 175 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 CBWD6Q4V339 395 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 CBWD3Q5JTY5 395 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 CBWD5Q5RIA9 395 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 PLEKHH3Q7Z736 793 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 KIAA1328Q86T90 577 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 BICD1Q96G01 975 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 WDR24Q96S15 920 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 IRX2Q9BZI1 471 aaPredicted RBP18.23■□□□□ 0.51
CTSA-207ENST00000484855 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
CTSA-207ENST00000484855 FHOD1Q9Y613 1164 aa18.23■□□□□ 0.51
CTSA-207ENST00000484855 FANCGO15287 622 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
CTSA-207ENST00000484855 ARHGAP25P42331 645 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 VAMP7P51809 220 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
CTSA-207ENST00000484855 TAPT1Q6NXT6 567 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 SLC39A4Q6P5W5 647 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 TAS1R3Q7RTX0 852 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 ZSWIM2Q8NEG5 633 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 DEPTORQ8TB45 409 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 ATP8B4Q8TF62 1192 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 SPAG5Q96R06 1193 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 SIX2Q9NPC8 291 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
CTSA-207ENST00000484855 GOLGA8IPA6NC78 632 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 LRRIQ4A6NIV6 560 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 GOLGA8JA6NMD2 632 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 MAFO75444 373 aaPredicted RBP18.21■□□□□ 0.51
CTSA-207ENST00000484855 SERPING1P05155 500 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 KIF11P52732 1056 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SPA17Q15506 151 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 BRDTQ58F21 947 aaPredicted RBP18.21■□□□□ 0.51
CTSA-207ENST00000484855 HGSNATQ68CP4 663 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SAAL1Q96ER3 474 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SSU72P8A0A1W2PR75 194 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 AKR1B10O60218 316 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 TLR2O60603 784 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SCP2P22307 547 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SLC26A2P50443 739 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 ARHGAP1Q07960 439 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
CTSA-207ENST00000484855 PLCB4Q15147 1175 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 ASIC2Q16515 512 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SNRNP35Q16560 246 aaKnown RBP18.21■□□□□ 0.51
CTSA-207ENST00000484855 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 SMARCAD1Q9H4L7 1026 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
CTSA-207ENST00000484855 MANSC4A6NHS7 340 aaPredicted RBP18.2■□□□□ 0.5
CTSA-207ENST00000484855 ABL1P00519 1130 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 GH1P01241 217 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 ADRB2P07550 413 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 DLG4P78352 724 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 STRN3Q13033 797 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 LAMC2Q13753 1193 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 MAMDC4Q6UXC1 1216 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 JAKMIP2Q96AA8 810 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 MAML3Q96JK9 1138 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 AIPL1Q9NZN9 384 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 MYO6Q9UM54 1294 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 DOCK3Q8IZD9 2030 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 RBM47A0AV96 593 aaKnown RBP18.2■□□□□ 0.5
CTSA-207ENST00000484855 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
CTSA-207ENST00000484855 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
CTSA-207ENST00000484855 GARTP22102 1010 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 CYP27A1Q02318 531 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 GJC2Q5T442 439 aaPredicted RBP18.2■□□□□ 0.5
CTSA-207ENST00000484855 CBWD2Q8IUF1 395 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 KCNN1Q92952 543 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 KATNBL1Q9H079 304 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 INTS2Q9H0H0 1204 aaKnown RBP18.2■□□□□ 0.5
CTSA-207ENST00000484855 TRPC6Q9Y210 931 aa18.2■□□□□ 0.5
CTSA-207ENST00000484855 ADGRA2Q96PE1 1338 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 ZNF263O14978 683 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 GAS2O43903 313 aaKnown RBP18.19■□□□□ 0.5
CTSA-207ENST00000484855 LCA5LO95447 670 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 LIG4P49917 911 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 ARID5AQ03989 594 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 ZNF569Q5MCW4 686 aa18.19■□□□□ 0.5
CTSA-207ENST00000484855 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms