RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NKD2Q969F2 451 aaPredicted RBP5.97□□□□□ -1.45
SMC4-215ENST00000484799 RNPC3Q96LT9 517 aaKnown RBP5.97□□□□□ -1.45
SMC4-215ENST00000484799 OSBPL6Q9BZF3 934 aa5.97□□□□□ -1.45
SMC4-215ENST00000484799 H2AFY2Q9P0M6 372 aaPredicted RBP5.97□□□□□ -1.45
SMC4-215ENST00000484799 MSRAQ9UJ68 235 aa5.97□□□□□ -1.45
SMC4-215ENST00000484799 MYPNQ86TC9 1320 aa5.97□□□□□ -1.45
SMC4-215ENST00000484799 A0A0A6YYJ9 748 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 NRP1O14786 923 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 NARSO43776 548 aaKnown RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 NRP2O60462 931 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 OPHN1O60890 802 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 NRG3P56975 720 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 SAFB2Q14151 953 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMC4-215ENST00000484799 LRRC32Q14392 662 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 SPTY2D1Q68D10 685 aaPredicted RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 ELOA2Q8IYF1 753 aaPredicted RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 MB21D1Q8N884 522 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 CDYL2Q8N8U2 506 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 ZNF512Q96ME7 567 aaPredicted RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 TRIM8Q9BZR9 551 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 PIF1Q9H611 641 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 ZNF703Q9H7S9 590 aaPredicted RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 MMRN2Q9H8L6 949 aa5.96□□□□□ -1.46
SMC4-215ENST00000484799 USP36Q9P275 1121 aaKnown RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 ING1Q9UK53 422 aaPredicted RBP5.96□□□□□ -1.46
SMC4-215ENST00000484799 RECQL4O94761 1208 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 ESRP1Q6NXG1 681 aaKnown RBP5.95□□□□□ -1.46
SMC4-215ENST00000484799 LMBR1LQ6UX01 489 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 SYNE4Q8N205 404 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 CLIP3Q96DZ5 547 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 HECAQ9UBI9 543 aaPredicted RBP5.95□□□□□ -1.46
SMC4-215ENST00000484799 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 NOC2LQ9Y3T9 749 aaKnown RBP5.95□□□□□ -1.46
SMC4-215ENST00000484799 PCDHB6Q9Y5E3 794 aa5.95□□□□□ -1.46
SMC4-215ENST00000484799 ZNF891A8MT65 544 aaPredicted RBP5.94□□□□□ -1.46
SMC4-215ENST00000484799 RPS6KA4O75676 772 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 PEX11BO96011 259 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 SCNN1GP51170 649 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 SPIDRQ14159 915 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 UNQ6494/PRO21346Q6UXR6 183 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 CACTINQ8WUQ7 758 aaKnown RBP5.94□□□□□ -1.46
SMC4-215ENST00000484799 ST8SIA2Q92186 375 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 PGBD4Q96DM1 585 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 CPPED1Q9BRF8 314 aaPredicted RBP5.94□□□□□ -1.46
SMC4-215ENST00000484799 MENTQ9BUN1 341 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 SLC2A4RGQ9NR83 387 aa5.94□□□□□ -1.46
SMC4-215ENST00000484799 ALDH1A2O94788 518 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 POU3F2P20265 443 aaPredicted RBP5.93□□□□□ -1.46
SMC4-215ENST00000484799 PTGS2P35354 604 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 INHBCP55103 352 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 DPTQ07507 201 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 PCBP1Q15365 356 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMC4-215ENST00000484799 Q6ZRM9 215 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 FRMD7Q6ZUT3 714 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 LEO1Q8WVC0 666 aaPredicted RBP5.93□□□□□ -1.46
SMC4-215ENST00000484799 GAB3Q8WWW8 586 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 HAS1Q92839 578 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 CEP89Q96ST8 783 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 MNTQ99583 582 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 FEZ1Q99689 392 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 PITHD1Q9GZP4 211 aaPredicted RBP5.93□□□□□ -1.46
SMC4-215ENST00000484799 NRDE2Q9H7Z3 1164 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 XDHP47989 1333 aa5.93□□□□□ -1.46
SMC4-215ENST00000484799 TMEM191CA6NGB0 347 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 FAM20BO75063 409 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 HSP90B1P14625 803 aaKnown RBP5.92□□□□□ -1.46
SMC4-215ENST00000484799 DSG1Q02413 1049 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 FAM83AQ86UY5 434 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 USP7Q93009 1102 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 CHFRQ96EP1 664 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 ANO3Q9BYT9 981 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 MTFR1LQ9H019 292 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 ZMAT4Q9H898 229 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 CEP72Q9P209 647 aa5.92□□□□□ -1.46
SMC4-215ENST00000484799 A0A087X1B8 175 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 MTSS1O43312 755 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 PPFIA4O75335 1185 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 FKBP9O95302 570 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 GAAP10253 952 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 HK1P19367 917 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 GPR15P49685 360 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 DUSP2Q05923 314 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 CD69Q07108 199 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 GPR158Q5T848 1215 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 FKBP9P1Q75LS8 142 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 APBB1IPQ7Z5R6 666 aaPredicted RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 ZNF610Q8N9Z0 462 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 GLB1L3Q8NCI6 653 aaPredicted RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 RSAD2Q8WXG1 361 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 ZNF496Q96IT1 587 aaPredicted RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 TARS2Q9BW92 718 aaKnown RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 SLKQ9H2G2 1235 aaPredicted RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 SPTLC3Q9NUV7 552 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
SMC4-215ENST00000484799 EIF2B4Q9UI10 523 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms