RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 SMC2O95347 1197 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 PARNO95453 639 aaKnown RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 PIGRP01833 764 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 CXCL10P02778 98 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 EDN1P05305 212 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 CTSHP09668 335 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 IQCF3P0C7M6 154 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 IDEP14735 1019 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 BMP6P22004 513 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 EIF4BP23588 611 aaKnown RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 ITGB8P26012 769 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 RFC2P35250 354 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 CASP5P51878 434 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 EFNA5P52803 228 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 NLRP11P59045 1033 aaKnown RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 GTF2BQ00403 316 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TMEM62Q0P6H9 643 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 PSMD2Q13200 908 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 MORC3Q14149 939 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 LPIN1Q14693 890 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 GPNMBQ14956 572 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FAM187BQ17R55 369 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 SKOR2Q2VWA4 1001 aaPredicted RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FBXO47Q5MNV8 452 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TSHZ1Q6ZSZ6 1077 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FAM43BQ6ZT52 329 aaPredicted RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 TAS1R3Q7RTX0 852 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 ZNF720Q7Z2F6 126 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 HAUS6Q7Z4H7 955 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 MAP4K3Q8IVH8 894 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FAM178BQ8IXR5 827 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TRIML1Q8N9V2 468 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 USP38Q8NB14 1042 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 GLIS3Q8NEA6 775 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TRIM43Q96BQ3 446 aaPredicted RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 IFT74Q96LB3 600 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 PRIMPOLQ96LW4 560 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 OSMRQ99650 979 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FDXACB1Q9BRP7 624 aaPredicted RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 KIFC3Q9BVG8 833 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 OSBPL7Q9BZF2 842 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 C2orf40Q9H1Z8 148 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 FZD8Q9H461 694 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 MINDY3Q9H8M7 445 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 CDHR5Q9HBB8 845 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 POLD4Q9HCU8 107 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 KMT5AQ9NQR1 393 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TMEM39AQ9NV64 488 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 EXOC1Q9NV70 894 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 RMND1Q9NWS8 449 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 KIAA1468Q9P260 1216 aa7.09□□□□□ -1.27
NCL-209ENST00000484328 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
NCL-209ENST00000484328 PDCD11Q14690 1871 aaKnown RBP7.09□□□□□ -1.28
NCL-209ENST00000484328 K7ENM7 598 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 M0QZ92 97 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SLC16A4O15374 487 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 TSPAN1O60635 241 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 NBNO60934 754 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 TIMP1P01033 207 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SRGAP2CP0DJJ0 459 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 MYBP10242 640 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SFPQP23246 707 aaKnown RBP eCLIP7.08□□□□□ -1.28
NCL-209ENST00000484328 NMT1P30419 496 aaKnown RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 CYP2C18P33260 490 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 HOXD13P35453 343 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SMTNP53814 917 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 STK4Q13043 487 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 CAMK4Q16566 473 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 PLEKHG4Q58EX7 1191 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 HERC4Q5GLZ8 1057 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 ZNF658Q5TYW1 1059 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 MFSD5Q6N075 450 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 CAVIN1Q6NZI2 390 aaKnown RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 FAM228AQ86W67 206 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 ZBTB8OSQ8IWT0 167 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 C7orf61Q8IZ16 206 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 MYCT1Q8N699 235 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 TET1Q8NFU7 2136 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SCFD1Q8WVM8 642 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 ERCC4Q92889 916 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 HPS3Q969F9 1004 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SMARCE1Q969G3 411 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 SYAP1Q96A49 352 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 GCOM2Q9BZD3 368 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 GTPBP4Q9BZE4 634 aaKnown RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 PPP1R12CQ9BZL4 782 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 INO80BQ9C086 356 aaPredicted RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 AGO3Q9H9G7 860 aaKnown RBP7.08□□□□□ -1.28
NCL-209ENST00000484328 ERVK-5Q9HDB9 667 aa7.08□□□□□ -1.28
NCL-209ENST00000484328 AGPAT5Q9NUQ2 364 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms