RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TLDC2A0PJX2 215 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 POTEMA6NI47 508 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 E7ENQ6 273 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 TRAF5O00463 557 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 EDIL3O43854 480 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 CACNA2D1P54289 1103 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 RCN2Q14257 317 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 LRRC41Q15345 812 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 MFSD4BQ5TF39 518 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 TAF4BQ92750 862 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 GANQ9H2C0 597 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 FGFR1OP2Q9NVK5 253 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 PFDN1O60925 122 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 GSTA2P09210 222 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 USP11P51784 963 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 IFI35P80217 286 aaPredicted RBP12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 RASA3Q14644 834 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 ZC2HC1CQ53FD0 456 aaPredicted RBP12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 EYA3Q99504 573 aa12.46□□□□□ -0.42
SEC61A1-205ENST00000483956 TDP2O95551 362 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 KCNA3P22001 575 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 RPL13P26373 211 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 PDE6CP51160 858 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ASIC2Q16515 512 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 HYIQ5T013 277 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ARL10Q8N8L6 244 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 AZIN2Q96A70 460 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 GBP5Q96PP8 586 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 SUN1O94901 812 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ADCY7P51828 1080 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 CNPY1Q3B7I2 92 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 PTPRN2Q92932 1015 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 AP1M1Q9BXS5 423 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 PACSIN1Q9BY11 444 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 CARD9Q9H257 536 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ADAMTS1Q9UHI8 967 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 PCDHA2Q9Y5H9 948 aa12.45□□□□□ -0.42
SEC61A1-205ENST00000483956 ZBTB48P10074 688 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 ANXA13P27216 316 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 CDK8P49336 464 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 SESN3P58005 492 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 TTC8Q8TAM2 541 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 VCX3BQ9H321 246 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 VCX3AQ9NNX9 186 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 KDM3AQ9Y4C1 1321 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 CETN3O15182 167 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 SLC26A4O43511 780 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 FUT4P22083 530 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 FAM47EQ6ZV65 393 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 SESTD1Q86VW0 696 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 FAM133AQ8N9E0 248 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 RBBP8NLQ8NC74 664 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 DDX47Q9H0S4 455 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 CCDC134Q9H6E4 229 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 JAG2Q9Y219 1238 aa12.44□□□□□ -0.42
SEC61A1-205ENST00000483956 CCDC188H7C350 402 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 KCNK3O14649 394 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 NVLO15381 856 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 LDHCP07864 332 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CCNB1P14635 433 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ETS2P15036 469 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ZNF24P17028 368 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CCNFP41002 786 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 SETDB1Q15047 1291 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 LRRC14Q15048 493 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ECM1Q16610 540 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 EDRF1Q3B7T1 1238 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms