RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 TRIM49BA6NDI0 452 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 GOLGA6L9A6NEM1 432 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 CETN3O15182 167 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ZSCAN12O43309 604 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 CALUO43852 315 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PQBP1O60828 265 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ATP9AO75110 1047 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TBCAO75347 108 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TIMP1P01033 207 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PSAPP07602 524 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ACRP10323 421 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 MYCLP12524 364 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 MYOGP15173 224 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 KCNA2P16389 499 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 EIF2AK2P19525 551 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 EDNRBP24530 442 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ABCD1P33897 745 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 GCLCP48506 637 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 HERVK_113P62684 666 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 CYP4A11Q02928 519 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 UBXN1Q04323 297 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 RBL2Q08999 1139 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TBC1D8BQ0IIM8 1120 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ADAM9Q13443 819 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 MAN2A1Q16706 1144 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PUS10Q3MIT2 529 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 VWA3BQ502W6 1294 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TREML2Q5T2D2 321 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 MFSD5Q6N075 450 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PADI6Q6TGC4 694 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 LRRC55Q6ZSA7 311 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TRIM67Q6ZTA4 783 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 FRMD5Q7Z6J6 570 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TMTC1Q8IUR5 882 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 CCAR2Q8N163 923 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ANKRD35Q8N283 1001 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 FAM133AQ8N9E0 248 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TC2NQ8N9U0 490 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 IL31RAQ8NI17 732 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 GOLGA5Q8TBA6 731 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 MORC4Q8TE76 937 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 SCFD1Q8WVM8 642 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ATP6V0A1Q93050 837 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 BAG1Q99933 345 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 LXNQ9BS40 222 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 STRA6Q9BX79 667 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 ASCC2Q9H1I8 757 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 VPS16Q9H269 839 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PARVGQ9HBI0 331 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 METTL14Q9HCE5 456 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 BTBD7Q9P203 1132 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 LARSQ9P2J5 1176 aaKnown RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 RBPJLQ9UBG7 517 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TCEAL9Q9UHQ7 104 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PNMA3Q9UL41 463 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PYCARDQ9ULZ3 195 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 CAPN11Q9UMQ6 739 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PPME1Q9Y570 386 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PAXBP1Q9Y5B6 917 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 PARP14Q460N5 1801 aa5.96□□□□□ -1.46
COL17A1-206ENST00000483876 TRANK1O15050 2925 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 DNAJC25-GNG10A0A024R161 153 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 IGKV6D-21A0A0A0MT36 114 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 ARHGEF35A5YM69 484 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 EPOPA6NHQ4 379 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 C19orf67A6NJJ6 358 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 SLC16A3O15427 465 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 STRNO43815 780 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CNMDO75829 334 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 FAM13AO94988 1023 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CCNE2O96020 404 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CSF2RAP15509 400 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 HNRNPH3P31942 346 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CASP14P31944 242 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 YWHABP31946 246 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 RGS2P41220 211 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MTIF2P46199 727 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 RARRES1P49788 294 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PLXNA3P51805 1871 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 VCPP55072 806 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CDK17Q00537 523 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 ZP2Q05996 745 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MAP2K5Q13163 448 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NEDD9Q14511 834 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PLS1Q14651 629 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 LRRC41Q15345 812 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NBPF20Q3BBV1 942 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 HSP90AA4PQ58FG1 418 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MIIPQ5JXC2 388 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MFSD14CQ5VZR4 134 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 ABHD15Q6UXT9 468 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NYAP1Q6ZVC0 841 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 TMEM139Q8IV31 216 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 SLC9A9Q8IVB4 645 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 EXOC8Q8IYI6 725 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 ABRAQ8N0Z2 381 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MYCT1Q8N699 235 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF397Q8NF99 534 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms