RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 NRXN2Q9P2S2 1712 aa16.51■□□□□ 0.23
DDR1-244ENST00000482873 PGRMC1O00264 195 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 KRIT1O00522 736 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 PPP1R12AO14974 1030 aaPredicted RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 TTI1O43156 1089 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 EYA4O95677 639 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 U2AF1L4Q8WU68 220 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.233e-6■■■□□ 17.9
DDR1-244ENST00000482873 ZNF577Q9BSK1 485 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 UNC45AQ9H3U1 944 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 DRD4P21917 467 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 EPHA7Q15375 998 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 ODR4Q5SWX8 454 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
DDR1-244ENST00000482873 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 HVCN1Q96D96 273 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
DDR1-244ENST00000482873 BTNL10A8MVZ5 291 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 PDXKO00764 312 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 MTMR3Q13615 1198 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 CBWD6Q4V339 395 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 CBWD3Q5JTY5 395 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 CBWD5Q5RIA9 395 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 FOXR2Q6PJQ5 311 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 NAGPAQ9UK23 515 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 F8VZ95 297 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 TBX3O15119 743 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 SF3A3Q12874 501 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDR1-244ENST00000482873 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 MAGEC3Q8TD91 643 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 DPH5Q9H2P9 285 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 OSGEPQ9NPF4 335 aa16.49■□□□□ 0.23
DDR1-244ENST00000482873 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
DDR1-244ENST00000482873 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 MGRN1O60291 552 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 PSMD10O75832 226 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 CIITAP33076 1130 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 C1orf186Q6ZWK4 172 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 CCDC50Q8IVM0 306 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 FAM178BQ8IXR5 827 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 LARGE2Q8N3Y3 721 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 IL31RAQ8NI17 732 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 PSMD1Q99460 953 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 ZMYM2Q9UBW7 1377 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 ECM2O94769 699 aaPredicted RBP16.48■□□□□ 0.23
DDR1-244ENST00000482873 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 LDHDQ86WU2 507 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 TPCN2Q8NHX9 752 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 LXNQ9BS40 222 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 WDR11Q9BZH6 1224 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
DDR1-244ENST00000482873 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
DDR1-244ENST00000482873 CCDC188H7C350 402 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 NFIBO00712 420 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 ENTPD3O75355 529 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 EZRP15311 586 aaKnown RBP16.47■□□□□ 0.23
DDR1-244ENST00000482873 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 SYCP3Q8IZU3 236 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 TRIM31Q9BZY9 425 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 KDM4CQ9H3R0 1056 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 COL20A1Q9P218 1284 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 DDX3XO00571 662 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■■■■ 37.9
DDR1-244ENST00000482873 SORBS3O60504 671 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 CAND2O75155 1236 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 COPB2P35606 906 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 DLG4P78352 724 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 NBPF9Q3BBW0 867 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 SEC14L1Q92503 715 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 CHMP6Q96FZ7 201 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 XPO6Q96QU8 1125 aaKnown RBP16.47■□□□□ 0.23
DDR1-244ENST00000482873 POLR3CQ9BUI4 534 aaPredicted RBP16.47■□□□□ 0.23
DDR1-244ENST00000482873 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 ATP8A1Q9Y2Q0 1164 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 NR2E1Q9Y466 385 aa16.47■□□□□ 0.23
DDR1-244ENST00000482873 IPO5O00410 1097 aaKnown RBP16.46■□□□□ 0.23
DDR1-244ENST00000482873 EVI5O60447 810 aa16.46■□□□□ 0.23
DDR1-244ENST00000482873 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.23
DDR1-244ENST00000482873 DNAJC8O75937 253 aaPredicted RBP16.46■□□□□ 0.23
DDR1-244ENST00000482873 RPL13P26373 211 aaKnown RBP16.46■□□□□ 0.23
DDR1-244ENST00000482873 ELF3P78545 371 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms