RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 NR2F2P24468 414 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PON1P27169 355 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 CHRNA3P32297 505 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PTGIRP43119 386 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PDIA5Q14554 519 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 LONRF1Q17RB8 773 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 AGGF1Q8N302 714 aaeCLIP11.89□□□□□ -0.51
RPGR-208ENST00000482855 DRAXINQ8NBI3 349 aaPredicted RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 ASAP1Q9ULH1 1129 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 ACADSP16219 412 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 STX2P32856 288 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 PEX5P50542 639 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 VSTM1Q6UX27 236 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 APBB1IPQ7Z5R6 666 aaPredicted RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 CCDC25Q86WR0 208 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 VSIG1Q86XK7 387 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 CTNNBL1Q8WYA6 563 aaPredicted RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 LRMDAQ9H2I8 198 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 VCXQ9H320 206 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 KCTD10Q9H3F6 313 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 PIDD1Q9HB75 910 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 NCANO14594 1321 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 CREB1P16220 341 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 HSPA6P17066 643 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 MGAT5Q09328 741 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 SETDB1Q15047 1291 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 ECHDC2Q86YB7 292 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.88□□□□□ -0.51
RPGR-208ENST00000482855 SCFD1Q8WVM8 642 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 DNAJC9Q8WXX5 260 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 RPS6KC1Q96S38 1066 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 CTNNAL1Q9UBT7 734 aa11.88□□□□□ -0.51
RPGR-208ENST00000482855 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
RPGR-208ENST00000482855 MAP3K13O43283 966 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 SLC37A4O43826 429 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PLCG2P16885 1265 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ABCB4P21439 1286 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 LMNB2Q03252 620 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PPATQ06203 517 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ACVR2BQ13705 512 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 FRMD5Q7Z6J6 570 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ZC3H3Q8IXZ2 948 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ASAP3Q8TDY4 903 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 GRAMD1AQ96CP6 724 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 SERPINB12Q96P63 405 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 STX8Q9UNK0 236 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PFASO15067 1338 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 SYNGAP1Q96PV0 1343 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PITPNM2Q9BZ72 1349 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 GFPT2O94808 682 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TDP2O95551 362 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TMEM253P0C7T8 217 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 ADRA2BP18089 450 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 VCAM1P19320 739 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 SP100P23497 879 aaPredicted RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 MTFR1Q15390 333 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 MUM1Q2TAK8 710 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 DCAF17Q5H9S7 520 aaPredicted RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 CGB2Q6NT52 195 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TRMT10CQ7L0Y3 403 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 MYLK2Q9H1R3 596 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PCYOX1Q9UHG3 505 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 H0Y3Z8 333 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 BAG3O95817 575 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms