RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CLIP2Q9UDT6 1046 aa7.67□□□□□ -1.18
CHD6-209ENST00000482596 IL17BQ9UHF5 180 aa7.67□□□□□ -1.18
CHD6-209ENST00000482596 ISY1Q9ULR0 285 aaKnown RBP7.67□□□□□ -1.18
CHD6-209ENST00000482596 PCDHB7Q9Y5E2 793 aa7.67□□□□□ -1.18
CHD6-209ENST00000482596 PCDHGA5Q9Y5G8 931 aa7.67□□□□□ -1.18
CHD6-209ENST00000482596 KAT6AQ92794 2004 aa7.67□□□□□ -1.18
CHD6-209ENST00000482596 WDR81Q562E7 1941 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 TTC24A2A3L6 582 aaPredicted RBP7.66□□□□□ -1.18
CHD6-209ENST00000482596 NT5C1B-RDH14C9J2C7 533 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 RFPL2O75678 378 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 BMP3P12645 472 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 SARSP49591 514 aaKnown RBP7.66□□□□□ -1.18
CHD6-209ENST00000482596 CLCN4P51793 760 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 STAT2P52630 851 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 WNT7BP56706 349 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CYP4F3Q08477 520 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 KCNH2Q12809 1159 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 QPCTQ16769 361 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 C16orf86Q6ZW13 317 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CACNA2D4Q7Z3S7 1137 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CERS3Q8IU89 383 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 FMNL3Q8IVF7 1028 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 SLC39A11Q8N1S5 342 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 TSC1Q92574 1164 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 MRGPRX2Q96LB1 330 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 ZNF558Q96NG5 402 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 LMAN1LQ9HAT1 526 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 COPRSQ9NQ92 184 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 HSPBP1Q9NZL4 362 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 PADI3Q9ULW8 664 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CDY2AQ9Y6F7 541 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 CACNA1DQ01668 2161 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 AHCTF1Q8WYP5 2266 aa7.66□□□□□ -1.18
CHD6-209ENST00000482596 A0A1B0GTL3 188 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 PATE3B3GLJ2 98 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 H3BRB1 525 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 COL4A2P08572 1712 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 PPM1AP35813 382 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 PXNP49023 591 aaPredicted RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 SKOR1P84550 965 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 CENPEQ02224 2701 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 IKQ13123 557 aaPredicted RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 LY6DQ14210 128 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 KRTAP21-3Q3LHN1 58 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 PIP4P1Q86T03 277 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 WDR5BQ86VZ2 330 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 MARCH9Q86YJ5 346 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 VPS52Q8N1B4 723 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 PNPLA1Q8N8W4 532 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 LMBR1Q8WVP7 490 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 GAB3Q8WWW8 586 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 KXD1Q9BQD3 176 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 FTHL17Q9BXU8 183 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 SLC32A1Q9H598 525 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 DKK4Q9UBT3 224 aa7.65□□□□□ -1.18
CHD6-209ENST00000482596 MRPS17Q9Y2R5 130 aaKnown RBP7.65□□□□□ -1.18
CHD6-209ENST00000482596 DOCK5Q9H7D0 1870 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 MAGEB6P1A0A0J9YX57 407 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 C2CD2LO14523 706 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 INPPL1O15357 1258 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 PPFIA4O75335 1185 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 RPP40O75818 363 aaKnown RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 CAVIN2O95810 425 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 CTHP32929 405 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 RPS6P62753 249 aaKnown RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 PFKPQ01813 784 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 CREB5Q02930 508 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 LAMC2Q13753 1193 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 TTC39AQ5SRH9 613 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 SLFN13Q68D06 897 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 TMEM173Q86WV6 379 aaPredicted RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 RPAP2Q8IXW5 612 aaPredicted RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 CMASQ8NFW8 434 aaPredicted RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 SNIP1Q8TAD8 396 aaKnown RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 CLEC4DQ8WXI8 215 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 SMG7Q92540 1137 aaKnown RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 ZNF707Q96C28 371 aaPredicted RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 CRNKL1Q9BZJ0 848 aaKnown RBP7.64□□□□□ -1.19
CHD6-209ENST00000482596 FZD8Q9H461 694 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 MAN1C1Q9NR34 630 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.64□□□□□ -1.192e-14■□□□□ 9.2
CHD6-209ENST00000482596 IRAK3Q9Y616 596 aa7.64□□□□□ -1.19
CHD6-209ENST00000482596 PRKAB2O43741 272 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 LGALS2P05162 132 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 ICAM1P05362 532 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 CTSAP10619 480 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 KLRC2P26717 231 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 RDXP35241 583 aaKnown RBP7.63□□□□□ -1.19
CHD6-209ENST00000482596 ALDH7A1P49419 539 aaKnown RBP7.63□□□□□ -1.19
CHD6-209ENST00000482596 METAP2P50579 478 aaKnown RBP eCLIP7.63□□□□□ -1.19
CHD6-209ENST00000482596 ZNF423Q2M1K9 1284 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 TMEM266Q2M3C6 531 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 PLK5Q496M5 336 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 C12orf60Q5U649 245 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms