RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 MAPK8IP1Q9UQF2 711 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 TAF1P21675 1872 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 A0A096LPE4 126 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 A0A1W2PPZ6 126 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 TBX3O15119 743 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PLSCR1O15162 318 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 POLR2DO15514 142 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 PRDM1O75626 825 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 TOP1P11387 765 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 NPR1P16066 1061 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 EPHA1P21709 976 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 SFPQP23246 707 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNX13-208ENST00000482558 ITPKAP23677 461 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PRPHP41219 470 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PREPP48147 710 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 FKBP1AP62942 108 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 MORC3Q14149 939 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 SYCP1Q15431 976 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 TM4SF20Q53R12 229 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 RCSD1Q6JBY9 416 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 THNSL2Q86YJ6 484 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 TEX11Q8IYF3 940 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 BLIDQ8IZY5 108 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 SRBD1Q8N5C6 995 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 TBC1D16Q8TBP0 767 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 UBASH3BQ8TF42 649 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 KLHDC7BQ96G42 594 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 CLIC6Q96NY7 704 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 POP1Q99575 1024 aaKnown RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 RTFDC1Q9BY42 306 aaPredicted RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 INO80BQ9C086 356 aaPredicted RBP8.62□□□□□ -1.03
SNX13-208ENST00000482558 CUEDC2Q9H467 287 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 ST7Q9NRC1 585 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 VPS54Q9P1Q0 977 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 ATP6V0A2Q9Y487 856 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PCDHB6Q9Y5E3 794 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PCDHA5Q9Y5H7 936 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PTCH2Q9Y6C5 1203 aa8.62□□□□□ -1.03
SNX13-208ENST00000482558 PLIN4Q96Q06 1357 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 CYP2D7A0A087X1C5 515 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 POLRMTO00411 1230 aaKnown RBP8.61□□□□□ -1.03
SNX13-208ENST00000482558 TRIM37O94972 964 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 PLEKHA8P1O95397 391 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 SERPINC1P01008 464 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 PRNPP04156 253 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 UQCRHP07919 91 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 MYCLP1P12525 358 aaPredicted RBP8.61□□□□□ -1.03
SNX13-208ENST00000482558 SKILP12757 684 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 GBP2P32456 591 aaPredicted RBP8.61□□□□□ -1.03
SNX13-208ENST00000482558 PPP1R2P41236 205 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 BTDP43251 543 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 NOVP48745 357 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 PLCD1P51178 756 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 UBASH3AP57075 661 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 PNOCQ13519 176 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 NCAPHQ15003 741 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 TMEM95Q3KNT9 176 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 MFSD14BQ5SR56 506 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 TTC8Q8TAM2 541 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 TGFBRAP1Q8WUH2 860 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 SHDQ96IW2 340 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 AK8Q96MA6 479 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 TMEM74Q96NL1 305 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
SNX13-208ENST00000482558 CSRNP2Q9H175 543 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 GLT8D2Q9H1C3 349 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 C6orf50Q9HD87 102 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 OSGEPQ9NPF4 335 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 BARHL2Q9NY43 387 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 ACTR10Q9NZ32 417 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
SNX13-208ENST00000482558 NRBP1Q9UHY1 535 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 NAV1Q8NEY1 1877 aa8.61□□□□□ -1.03
SNX13-208ENST00000482558 ESYT2A0FGR8 921 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 WTIPA6NIX2 430 aaPredicted RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 H3BRJ5 948 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 BIN1O00499 593 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 FBXO24O75426 580 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
SNX13-208ENST00000482558 CDK8P49336 464 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 SPAG1Q07617 926 aa8.6□□□□□ -1.03
SNX13-208ENST00000482558 MYBPC2Q14324 1141 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms