RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 HOOK1Q9UJC3 728 aaKnown RBP14.6□□□□□ -0.07
HDAC1-208ENST00000482310 USP20Q9Y2K6 914 aa14.6□□□□□ -0.07
HDAC1-208ENST00000482310 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
HDAC1-208ENST00000482310 GBF1Q92538 1859 aa14.6□□□□□ -0.07
HDAC1-208ENST00000482310 BIN1O00499 593 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 KLRC4O43908 158 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 TRAK2O60296 914 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 CAND2O75155 1236 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 RPS6KA5O75582 802 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 GCNT3O95395 438 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 RPLP2P05387 115 aaKnown RBP14.59□□□□□ -0.07
HDAC1-208ENST00000482310 ACRP10323 421 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 GAP43P17677 238 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 ZNF131P52739 623 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 RBL2Q08999 1139 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 PAK2Q13177 524 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 LPIN1Q14693 890 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 FAM26DQ5JW98 314 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 FBXO47Q5MNV8 452 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 RPAINQ86UA6 219 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 ZNF410Q86VK4 478 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 GLIS3Q8NEA6 775 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 SMARCE1Q969G3 411 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
HDAC1-208ENST00000482310 AGO3Q9H9G7 860 aaKnown RBP14.59□□□□□ -0.07
HDAC1-208ENST00000482310 IFT122Q9HBG6 1241 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 SLC39A2Q9NP94 309 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 LARSQ9P2J5 1176 aaKnown RBP14.59□□□□□ -0.07
HDAC1-208ENST00000482310 NR2E3Q9Y5X4 410 aa14.59□□□□□ -0.07
HDAC1-208ENST00000482310 CITO14578 2027 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 DENND3A2RUS2 1198 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 ERLIN2O94905 339 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 PRKCBP05771 671 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 MYBP10242 640 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 DARSP14868 501 aaKnown RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 CASP5P51878 434 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 SMTNP53814 917 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 PTENP60484 403 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 MBTD1Q05BQ5 628 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 ZC2HC1CQ53FD0 456 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 MFSD5Q6N075 450 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 FAM228AQ86W67 206 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 TMEM199Q8N511 208 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 CCDC47Q96A33 483 aaKnown RBP14.58□□□□□ -0.08
HDAC1-208ENST00000482310 CPB2Q96IY4 423 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 PCDHA5Q9Y5H7 936 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 LAMA3Q16787 3333 aa14.58□□□□□ -0.08
HDAC1-208ENST00000482310 FRMD3A2A2Y4 597 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 B4GALT5O43286 388 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 SMC2O95347 1197 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 EDN1P05305 212 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 SFPQP23246 707 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 NCKAP1LP55160 1127 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 FPGSQ05932 587 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 GPNMBQ14956 572 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 TCTN1Q2MV58 587 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 FAM26FQ5R3K3 315 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 L1TD1Q5T7N2 865 aaKnown RBP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 CDCA2Q69YH5 1023 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 CDR2LQ86X02 465 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 SMYD4Q8IYR2 804 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 BICD1Q96G01 975 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 IFIH1Q9BYX4 1025 aaKnown RBP14.57□□□□□ -0.08
HDAC1-208ENST00000482310 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 PADI3Q9ULW8 664 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 ST3GAL5Q9UNP4 418 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 PHLPP2Q6ZVD8 1323 aa14.57□□□□□ -0.08
HDAC1-208ENST00000482310 K7ERI5 159 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 PRPF6O94906 941 aaKnown RBP14.56□□□□□ -0.08
HDAC1-208ENST00000482310 MYL1P05976 194 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 PTMSP20962 102 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 CDC42EP1Q00587 391 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 STRN3Q13033 797 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 MAPK6Q16659 721 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 CNNM4Q6P4Q7 775 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 TAS1R3Q7RTX0 852 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 SRGAP1Q7Z6B7 1085 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 NELFCDQ8IXH7 590 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 TMEM161BQ8NDZ6 487 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 DBF4BQ8NFT6 615 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 SPIRE2Q8WWL2 714 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 FIZ1Q96SL8 496 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 IKZF4Q9H2S9 585 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 C17orf75Q9HAS0 396 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 TMEM63CQ9P1W3 806 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 SEL1LQ9UBV2 794 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 MAN1B1Q9UKM7 699 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 MAPK8IP1Q9UQF2 711 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
HDAC1-208ENST00000482310 GDAQ9Y2T3 454 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 ANK1P16157 1881 aa14.56□□□□□ -0.08
HDAC1-208ENST00000482310 TDRD15B5MCY1 1934 aaKnown RBP14.56□□□□□ -0.08
HDAC1-208ENST00000482310 COL6A3P12111 3177 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms