RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OXSMQ9NWU1 459 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 THG1LQ9NWX6 298 aaKnown RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 SLC5A4Q9NY91 659 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 HSPBP1Q9NZL4 362 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 TMX2Q9Y320 296 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 TELO2Q9Y4R8 837 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 SPO11Q9Y5K1 396 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ABHD14A-ACY1A0A1B0GW23 586 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 E2F8A0AVK6 867 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 GTPBP10A4D1E9 387 aaKnown RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 ETV2O00321 342 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 CHL1O00533 1208 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SCDO00767 359 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 TOR1BO14657 336 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 BUB1BO60566 1050 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 ULK1O75385 1050 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 KRT37O76014 449 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 CYP17A1P05093 508 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SLC5A1P13866 664 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 FAHP16930 419 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 CAPN3P20807 821 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SDHAP31040 664 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 VIPR1P32241 457 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 DDIT3P35638 169 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 PEX19P40855 299 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ZNF131P52739 623 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ROR1Q01973 937 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 FAPQ12884 760 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 STAT4Q14765 748 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 KCNA10Q16322 511 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 BTBD8Q5XKL5 378 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ZNF449Q6P9G9 518 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ETV3LQ6ZN32 361 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ATG14Q6ZNE5 492 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 RSRC2Q7L4I2 434 aaKnown RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 TMC6Q7Z403 805 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 TBC1D1Q86TI0 1168 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 AMIGO3Q86WK7 504 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SPATS2Q86XZ4 545 aaKnown RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 CILP2Q8IUL8 1156 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ARRDC4Q8NCT1 418 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 IL17REQ8NFR9 667 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 COG1Q8WTW3 980 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 POF1BQ8WVV4 589 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 IPCEF1Q8WWN9 437 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 CPA5Q8WXQ8 436 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ALG3Q92685 438 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SNX21Q969T3 373 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 CENPTQ96BT3 561 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ZNF830Q96NB3 372 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 CAMKK2Q96RR4 588 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 AP1M1Q9BXS5 423 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 MCOLN1Q9GZU1 580 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 RNF38Q9H0F5 515 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 CSRNP2Q9H175 543 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 PRKRIP1Q9H875 184 aaPredicted RBP4.83□□□□□ -1.64
VPS41-212ENST00000482217 RIC8BQ9NVN3 520 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 DTLQ9NZJ0 730 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 TRHDEQ9UKU6 1024 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 ZBTB21Q9ULJ3 1066 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 HCFC2Q9Y5Z7 792 aa4.83□□□□□ -1.64
VPS41-212ENST00000482217 IRS2Q9Y4H2 1338 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 MYOCOSA0A1B0GUC4 107 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 FAM90A27PA6NNH2 459 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 SMTNL1A8MU46 457 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 F5H423 210 aaPredicted RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 KCNK3O14649 394 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 LTFP02788 710 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 C4BPAP04003 597 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 U2AF1L5P0DN76 240 aaPredicted RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 GYS1P13807 737 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 KCNA2P16389 499 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 FNTBP49356 437 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 KIF11P52732 1056 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 SNX16P57768 344 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 BPIFB3P59826 476 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 HERVK_113P62684 666 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 DLG4P78352 724 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 U2AF1Q01081 240 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS41-212ENST00000482217 PDE1CQ14123 709 aaPredicted RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 TRIM14Q14142 442 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 KRT72Q14CN4 511 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 SAFBQ15424 915 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS41-212ENST00000482217 TARBP2Q15633 366 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 PAN2Q504Q3 1202 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 GPATCH4Q5T3I0 446 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 GPR158Q5T848 1215 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 CPZQ66K79 652 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 FSTL4Q6MZW2 842 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 SRLQ86TD4 932 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 SIAH1Q8IUQ4 282 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 RBM12BQ8IXT5 1001 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 RPGRQ92834 1020 aaKnown RBP4.82□□□□□ -1.64
VPS41-212ENST00000482217 TBC1D31Q96DN5 1066 aa4.82□□□□□ -1.64
VPS41-212ENST00000482217 TOE1Q96GM8 510 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms