RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 MYL7Q01449 175 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 SLMAPQ14BN4 828 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 ZKSCAN8Q15776 578 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 PALB2Q86YC2 1186 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 TPH2Q8IWU9 490 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 TXLNGYQ9BZA5 131 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 INTS2Q9H0H0 1204 aaKnown RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 EPB41L4BQ9H329 900 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.47■□□□□ 0.074e-20■■■■■ 173.9
CCDC78-211ENST00000481804 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 IRS2Q9Y4H2 1338 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 CFAP73A6NFT4 308 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 PODXLO00592 558 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 PPATQ06203 517 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 NUGGCQ68CJ6 796 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 ZNF746Q6NUN9 644 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 ZDHHC24Q6UX98 284 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 COL23A1Q86Y22 540 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 RHOT2Q8IXI1 618 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 KRT35Q92764 455 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 KLHL29Q96CT2 875 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 NENFQ9UMX5 172 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-211ENST00000481804 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
CCDC78-211ENST00000481804 EXOC3O60645 756 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 FTLP02792 175 aaPredicted RBP15.46■□□□□ 0.07
CCDC78-211ENST00000481804 SPATA31C1P0DKV0 1188 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 MARCKSL1P49006 195 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 CTTNQ14247 550 aaKnown RBP15.46■□□□□ 0.07
CCDC78-211ENST00000481804 UBAP2Q5T6F2 1119 aaKnown RBP15.46■□□□□ 0.07
CCDC78-211ENST00000481804 PIGWQ7Z7B1 504 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 SLC30A5Q8TAD4 765 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 ECT2Q9H8V3 914 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 RPTORQ8N122 1335 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 TCP11X1B4DZS4 312 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 SUN1O94901 812 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 HSPA6P17066 643 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 GBP1P32455 592 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 KCNJ1P48048 391 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 COG2Q14746 738 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 CRYMQ14894 314 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 LONRF1Q17RB8 773 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 ADAM7Q9H2U9 754 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 COG5Q9UP83 839 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 SLC12A4Q9UP95 1085 aa15.46■□□□□ 0.07
CCDC78-211ENST00000481804 MIF4GDA9UHW6 222 aaKnown RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 PAX7P23759 505 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 CBWD6Q4V339 395 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 CBWD3Q5JTY5 395 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 CBWD5Q5RIA9 395 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 FMNL3Q8IVF7 1028 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 KIF2BQ8N4N8 673 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 GDAP1Q8TB36 358 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 TBC1D22AQ8WUA7 517 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 APEX2Q9UBZ4 518 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 ANP32DO95626 131 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 KCNJ2P63252 427 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 PRELID2Q8N945 189 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 ARHGEF2Q92974 986 aaKnown RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 RUNDC3BQ96NL0 473 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 DNAJC17Q9NVM6 304 aaKnown RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 USP15Q9Y4E8 981 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 FOXN3O00409 490 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 TGFB1I1O43294 461 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 RIPK2O43353 540 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 SLURP2P0DP57 97 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 BCRP11274 1271 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 GAP43P17677 238 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 VCAM1P19320 739 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 NOVP48745 357 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 FAM178BQ8IXR5 827 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 SLC20A1Q8WUM9 679 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 EIF2AK1Q9BQI3 630 aaKnown RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 TRIM6Q9C030 488 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 UBE2TQ9NPD8 197 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 USP40Q9NVE5 1235 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 GRHL1Q9NZI5 618 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 ASIC3Q9UHC3 531 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 COL14A1Q05707 1796 aaKnown RBP15.45■□□□□ 0.06
CCDC78-211ENST00000481804 MYO3BQ8WXR4 1341 aa15.45■□□□□ 0.06
CCDC78-211ENST00000481804 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC78-211ENST00000481804 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 SLC26A4O43511 780 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 ADCY1Q08828 1119 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 EP400NLQ6ZTU2 488 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 ETNPPLQ8TBG4 499 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 AGPAT1Q99943 283 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 SLC24A3Q9HC58 644 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 NOP53Q9NZM5 478 aaKnown RBP15.44■□□□□ 0.06
CCDC78-211ENST00000481804 CNOT7Q9UIV1 285 aaKnown RBP15.44■□□□□ 0.06
CCDC78-211ENST00000481804 AGAP1Q9UPQ3 857 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
CCDC78-211ENST00000481804 SNX3O60493 162 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms