RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 DDX20Q9UHI6 824 aaKnown RBP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 DNAI1Q9UI46 699 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 CDC42EP3Q9UKI2 254 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 LIMCH1Q9UPQ0 1083 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 PMF1-BGLAPU3KQ54 211 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 H0Y858 1186 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 AP1G1O43747 822 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 TMEM127O75204 238 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 KLHL18O94889 574 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 PPP3CAQ08209 521 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 SSPNQ14714 243 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 UAP1L1Q3KQV9 507 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 MAP9Q49MG5 647 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 BTNL9Q6UXG8 535 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 OTOP2Q7RTS6 562 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 DGKHQ86XP1 1220 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 GLB1L3Q8NCI6 653 aaPredicted RBP6.75□□□□□ -1.33
UPF3A-207ENST00000481131 SLC35G2Q8TBE7 412 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 NRG4Q8WWG1 115 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 KCNN1Q92952 543 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 FATE1Q969F0 183 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
UPF3A-207ENST00000481131 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 NMRK2Q9NPI5 230 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 Q9UFV3 132 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 IPPQ9Y573 584 aa6.75□□□□□ -1.33
UPF3A-207ENST00000481131 CECR2Q9BXF3 1484 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 MAFGO15525 162 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 HTRA2O43464 458 aaPredicted RBP6.74□□□□□ -1.33
UPF3A-207ENST00000481131 HNRNPLP14866 589 aaKnown RBP eCLIP6.74□□□□□ -1.33
UPF3A-207ENST00000481131 ZNF28P17035 718 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 IL13P35225 146 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 MCAMP43121 646 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 STAT5BP51692 787 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 MGAT5Q09328 741 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 TOP3AQ13472 1001 aaPredicted RBP6.74□□□□□ -1.33
UPF3A-207ENST00000481131 GALEQ14376 348 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 GRM3Q14832 879 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 ATAT1Q5SQI0 421 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 TRMT10BQ6PF06 316 aaKnown RBP6.74□□□□□ -1.33
UPF3A-207ENST00000481131 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 TIFAQ96CG3 184 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 IRAK3Q9Y616 596 aa6.74□□□□□ -1.33
UPF3A-207ENST00000481131 CCDC154A6NI56 674 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 NRP2O60462 931 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 OFD1O75665 1012 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 HSPA6P17066 643 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 PDCP20941 246 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 WASP42768 502 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 CD69Q07108 199 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 GBX1Q14549 363 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 EIF4HQ15056 248 aaKnown RBP6.73□□□□□ -1.33
UPF3A-207ENST00000481131 C3orf36Q3SXR2 165 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 MUM1L1Q5H9M0 696 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 CCSAPQ6IQ19 270 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-207ENST00000481131 PRR18Q8N4B5 295 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.73□□□□□ -1.33
UPF3A-207ENST00000481131 OR2I1PQ8NGU4 316 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 DPF2Q92785 391 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 SAE1Q9UBE0 346 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-207ENST00000481131 FBXO10Q9UK96 956 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 SYNPO2Q9UMS6 1093 aa6.73□□□□□ -1.33
UPF3A-207ENST00000481131 SMARCA4P51532 1647 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 A0A1W2PR48 441 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 ERC2O15083 957 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 CAND2O75155 1236 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 LY86O95711 162 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 PI3P19957 117 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 GLDCP23378 1020 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 RPL13P26373 211 aaKnown RBP6.72□□□□□ -1.33
UPF3A-207ENST00000481131 POLD1P28340 1107 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 KCNQ1P51787 676 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 ARHGAP29Q52LW3 1261 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 CYB5RLQ6IPT4 315 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 USP45Q70EL2 814 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 GLB1L2Q8IW92 636 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 DIS3LQ8TF46 1054 aaKnown RBP6.72□□□□□ -1.33
UPF3A-207ENST00000481131 ZNF526Q8TF50 670 aaPredicted RBP6.72□□□□□ -1.33
UPF3A-207ENST00000481131 FAM84AQ96KN4 292 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 GREM2Q9H772 168 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 DNM3Q9UQ16 869 aa6.72□□□□□ -1.33
UPF3A-207ENST00000481131 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 A6NNZ2 444 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 CYP7B1O75881 506 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 MYBP10242 640 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 GSPT1P15170 499 aaKnown RBP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms