RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RNF149Q8NC42 400 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 ZNF668Q96K58 619 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-206ENST00000480362 NLRP4Q96MN2 994 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 GLT1D1Q96MS3 346 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 FAM49AQ9H0Q0 323 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-206ENST00000480362 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 EXOC7Q9UPT5 735 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 K7ERI5 159 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 VTNP04004 478 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 SCP2P22307 547 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 ITGA7Q13683 1181 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 TAS1R3Q7RTX0 852 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 SESTD1Q86VW0 696 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 NOC3LQ8WTT2 800 aaKnown RBP19.31■□□□□ 0.68
UPF3A-206ENST00000480362 KCNN1Q92952 543 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 TMEM134Q9H6X4 195 aa19.31■□□□□ 0.68
UPF3A-206ENST00000480362 AP5Z1O43299 807 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 ATP1A3P13637 1013 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 ZNF18P17022 549 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 CDK11BP21127 795 aaKnown RBP19.3■□□□□ 0.68
UPF3A-206ENST00000480362 FKBP3Q00688 224 aaKnown RBP19.3■□□□□ 0.68
UPF3A-206ENST00000480362 POU5F1BQ06416 359 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 STRN3Q13033 797 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 EDRF1Q3B7T1 1238 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 CDKAL1Q5VV42 579 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-206ENST00000480362 GDF6Q6KF10 455 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-206ENST00000480362 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 MAP4K3Q8IVH8 894 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 ZBTB8OSQ8IWT0 167 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 DNAJB3Q8WWF6 145 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 ZNF333Q96JL9 665 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 PPP1R16BQ96T49 567 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 C2orf40Q9H1Z8 148 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 THAP9Q9H5L6 903 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 OGDHLQ9ULD0 1010 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 PHF24Q9UPV7 400 aa19.3■□□□□ 0.68
UPF3A-206ENST00000480362 A0A087WZ62 844 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 A0A1W2PQ45 241 aaPredicted RBP19.29■□□□□ 0.68
UPF3A-206ENST00000480362 A0A1W2PQY0 241 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 DNM1LO00429 736 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 CLIC2O15247 247 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 FGFR1OPO95684 399 aaKnown RBP19.29■□□□□ 0.68
UPF3A-206ENST00000480362 EFNA5P52803 228 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 NLRP11P59045 1033 aaKnown RBP19.29■□□□□ 0.68
UPF3A-206ENST00000480362 PTENP60484 403 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 ADAM9Q13443 819 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 IRF2BP1Q8IU81 584 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 ARMC5Q96C12 935 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 EEF2KMTQ96G04 330 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 FDXACB1Q9BRP7 624 aaPredicted RBP19.29■□□□□ 0.68
UPF3A-206ENST00000480362 AGPAT3Q9NRZ7 376 aa19.29■□□□□ 0.68
UPF3A-206ENST00000480362 PHLPP2Q6ZVD8 1323 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 NR3C1P04150 777 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 PHKA2P46019 1235 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 GPC3P51654 580 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 CDC42EP1Q00587 391 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-206ENST00000480362 LRRC55Q6ZSA7 311 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 ZC3H3Q8IXZ2 948 aaKnown RBP19.28■□□□□ 0.68
UPF3A-206ENST00000480362 NME8Q8N427 588 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 GOLGA5Q8TBA6 731 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 NLRP7Q8WX94 980 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 CEP63Q96MT8 703 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 NFKBIZQ9BYH8 718 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 CCDC113Q9H0I3 377 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 IFT122Q9HBG6 1241 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 STARD7Q9NQZ5 370 aa19.28■□□□□ 0.68
UPF3A-206ENST00000480362 CGNQ9P2M7 1197 aaKnown RBP19.28■□□□□ 0.68
UPF3A-206ENST00000480362 TRIP12Q14669 1992 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-206ENST00000480362 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 TISP43B9A030 160 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 ANKRD63C9JTQ0 380 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 CETN3O15182 167 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 NR2F2P24468 414 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 RPL13P26373 211 aaKnown RBP19.27■□□□□ 0.68
UPF3A-206ENST00000480362 SNRPFP62306 86 aaKnown RBP19.27■□□□□ 0.68
UPF3A-206ENST00000480362 FANCCQ00597 558 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 TMEM62Q0P6H9 643 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 KCNJ12Q14500 433 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 NFIL3Q16649 462 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 TAF2Q6P1X5 1199 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 FILIP1Q7Z7B0 1213 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 ZNF410Q86VK4 478 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
UPF3A-206ENST00000480362 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 BICD1Q96G01 975 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 ADAMTS10Q9H324 1103 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 MAGEC2Q9UBF1 373 aaPredicted RBP19.27■□□□□ 0.68
UPF3A-206ENST00000480362 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 PCNTO95613 3336 aa19.27■□□□□ 0.68
UPF3A-206ENST00000480362 INO80B-WBP1J3KQ70 363 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 SGPL1O95470 568 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 TFRCP02786 760 aaKnown RBP19.26■□□□□ 0.67
UPF3A-206ENST00000480362 PRKCBP05771 671 aa19.26■□□□□ 0.67
UPF3A-206ENST00000480362 SPAG1Q07617 926 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms