RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 MMP20O60882 483 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ZNF202O95125 648 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 MAP3K6O95382 1288 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ALAS2P22557 587 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 CDC25AP30304 524 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ICAM3P32942 547 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 MAP2K2P36507 400 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 HTRA3P83110 453 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ITGB3BPQ13352 177 aaPredicted RBP7.46□□□□□ -1.22
USP48-208ENST00000479177 PPP2R5CQ13362 524 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 PDIA5Q14554 519 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 KARSQ15046 597 aaKnown RBP7.46□□□□□ -1.22
USP48-208ENST00000479177 STXBP2Q15833 593 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ZSCAN23Q3MJ62 389 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 GNPTABQ3T906 1256 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 TMEM119Q4V9L6 283 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 LRCH2Q5VUJ6 765 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 B3GNT9Q6UX72 402 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 RBM43Q6ZSC3 357 aaKnown RBP7.46□□□□□ -1.22
USP48-208ENST00000479177 HFE2Q6ZVN8 426 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 NLRX1Q86UT6 975 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 CABP7Q86V35 215 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 NUDT8Q8WV74 236 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 EDEM1Q92611 657 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 TIGD1Q96MW7 591 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
USP48-208ENST00000479177 RIT2Q99578 217 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 RAB34Q9BZG1 259 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 DISC1Q9NRI5 854 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 LRWD1Q9UFC0 647 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 PCDHA12Q9UN75 941 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 WDR81Q562E7 1941 aa7.46□□□□□ -1.22
USP48-208ENST00000479177 ASB14A6NK59 587 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 B4DLN1 442 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 POLR2DO15514 142 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 DHX15O43143 795 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 SLC26A4O43511 780 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 CPB1P15086 417 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 KCNA2P16389 499 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 PLCG1P19174 1290 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 CTGFP29279 349 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 UBA7P41226 1012 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 PLAURQ03405 335 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 GRB10Q13322 594 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 NAALADL2Q58DX5 795 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 PRSS36Q5K4E3 855 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 HYIQ5T013 277 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 NCAPH2Q6IBW4 605 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 KRBA2Q6ZNG9 492 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 C20orf204Q6ZNR8 217 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 ARMCX2Q7L311 632 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 PDILTQ8N807 584 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 SNX29Q8TEQ0 813 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 LRRC15Q8TF66 581 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 SOCS4Q8WXH5 440 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 USP6NLQ92738 828 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 DHX58Q96C10 678 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 MPHOSPH6Q99547 160 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 PYM1Q9BRP8 204 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 TEKT3Q9BXF9 490 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 GZF1Q9H116 711 aaPredicted RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 UNC45AQ9H3U1 944 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 USP25Q9UHP3 1055 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
USP48-208ENST00000479177 NFASCO94856 1347 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 KDM3AQ9Y4C1 1321 aa7.45□□□□□ -1.22
USP48-208ENST00000479177 TNPO2O14787 897 aaKnown RBP7.44□□□□□ -1.22
USP48-208ENST00000479177 CTAGE5O15320 804 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 MAFGO15525 162 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 CHMP2AO43633 222 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 ATP9AO75110 1047 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 MED24O75448 989 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 HOXC6P09630 235 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 SLFN14P0C7P3 912 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 UBA1P22314 1058 aaKnown RBP7.44□□□□□ -1.22
USP48-208ENST00000479177 STAT6P42226 847 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 FCGRTP55899 365 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 ZNF445P59923 1031 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 LACTBP83111 547 aaPredicted RBP7.44□□□□□ -1.22
USP48-208ENST00000479177 CAMK4Q16566 473 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 ECM1Q16610 540 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 LONRF3Q496Y0 759 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 KRT79Q5XKE5 535 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 HAUS3Q68CZ6 603 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 MAMDC4Q6UXC1 1216 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 OTOP1Q7RTM1 612 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 FBXO16Q8IX29 292 aaPredicted RBP7.44□□□□□ -1.22
USP48-208ENST00000479177 ELOA2Q8IYF1 753 aaPredicted RBP7.44□□□□□ -1.22
USP48-208ENST00000479177 IQUBQ8NA54 791 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 NPLOC4Q8TAT6 608 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 MAML3Q96JK9 1138 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms